| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0339 |
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| Symbol | |
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| ID | 4903366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 322892 |
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| End bp | 325033 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640143446 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001074382 |
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| Protein GI | 126455599 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC ACACGCCGCA CTCGTCGCCG CCCGCCTCGC CGACGCCGCC TCAGGGGCCC
GCGCCGAAGC GCCGCCGCTA TTTCCGCACG CTCGCGGGCC TCGTGCTCGG CGCGGCGATC
GCGGGCGGCG CGGTCGGCAC GTGGACGCTG CATCGCATCT GGACGGCGCT GCCGTCCGTC
GAGCCGCTCG CCGTCTATCG TCCGGCGCTG CCGCTGCGGA TCTTTTCGCG CGAAGGCGAG
CTGCTCGCCG AATACGGCGT CGAGCGCCGC GAGTTCGTGC CGCTCGACCG CATCCCGCCG
CTCGTGCGGC ACGCGCTGCT CGCGGCCGAG GATGCGCAGT TCTACACGCA CGGCGCGGTC
GACATCGGCG GGCTCGCGCG CGCGACGGTG GCGAACGTCG TCACCGGCCA GCCCGGGCAG
GGCGGCAGCA CGATCACGAT GCAGGTCGCG CGCAATTTCT TTCTGACGCG CGAGAAGGTG
CTGAGCCGCA AGCTCGCCGA GATCCTGATG TCGTACAAGC TCGAACGCGC GTACAGCAAG
GACAAGCTGC TCGAGCTGTA CATGAACGAG ATCTATCTCG GCGAGCGCGC GTACGGGTTC
GCGGCGGCCG CGTCGGTGTA CTTCGGCAAG CCGCTCGATG CGCTCACGCC CGGCGAGGCG
GCGGTGCTCG CGGGCCTGCC GAAGGCGCCG TCCGCGTTCA ATCCGGTCGT CAATCCGGCG
CGGGCGACGA TGCGCCGCAA CTACGTGCTC GGCCGCATGC GCGCGCTCGG GTATCTGGAC
GAGGCCGCGT ACCGGCAGGC CGCCGACGCG CCGATCGCGC TCGCGACCAC GCCGCCGCCC
GGCATCCTCG CCGCGCCGTA CGTCGCCGAG CGCGCGCGCC GGATGATGGT CGAGCGCTTC
CATGATGACG CCTACACGCT CGGCCTGGAC GTGACGACGA CGATCGCGAT GCGCGAGCAG
CGCGCGGCCG ACGCGGCGCT CGCGCGCGGG CTCGCGCAGG TCGGCCGGCG CGACGCGAAG
GACGCGCTCG AAGGCGCGCT CGTGTCGATC GACGCGGCGA CGGGCGACAT TCTCGCGCTC
GTCGGCGGCG CGGACTTCTC GCACAACGTG TTCGATCATG CGTTGCAGGC GTATCGGCAA
CCGGGTTCGA GCTTCAAGCC GTTCGTCTAT TCGGCCGCGC TGGAGAAAGG GATGTTCCCC
GGCGTGCTGA TCGACGACAC GCAGCGCACG CTGTCGCGCG ACGAAACCGG CGCGAACCCG
TGGCGGCCGC GCAATTTCGG CAACCACTAC GAAGGCTTCA TTCCGGTGCG GCGCGGGCTG
ATGCGCTCGA AGAACCTCGT CGCGGTGAGC CTGATGCAGG TCGCGCGGCC GGATTTCGTC
CAGCAGCACG CGGCGCGCTT CGGCTTCGAG CCGCTGCGCA ACCCCGCGTC GCTGCCGCTC
GCGCTCGGCG CGGGCTCGGC GACGCCGCTG GAGGTGGCGA GCGCCTACGG CGTGTTCGCC
AACGGCGGCG TGCGCATGGA GCCGCGCCTC ATCGAATCGG TGCGGCAGCG GCACGGCGGC
GCGCTGTTCG ACGCGCAGCC CGCGCCCGGC GTGCGCGTCA TTTCGGCGCG CAACGCGTTC
GTGATGGACA GCATGCTGCG CGACGTCGTC GCGCACGGCA CCGCGCGCCG CGCGGTCGCG
CTCAAGCGCG CGGACGCGGC GGGCAAGACC GGCACGTCGA ACGGCTCGAA GGACGTGTGG
TTCGCCGGCT ACTCGTCGGG CGTCGTATCG GTCGTCTGGA TGGGCTACGA CGCGCCGCGC
AGCCTCGGCC GCGCGACGGG CTCGTCGGCC GCGCTGCCCG TGTGGGTCGA CTACATGAAG
ACCGCGGTCG ACGGCCGCGG CGCGATCGAG CGCACGCCGC CCGCGGACGT CGCGCTCGTC
GACGGCGATT TCGTCTATGC CGAATACGCG AACGGCGACA AGTGCGCGCC GTCGCTGCCG
CCGTTCGTGC GCAGCCCGTT CGCGTGCGGC GCGGCGCGCG GTGCGCCGGC GGACGGCGGC
GCGCCGGCGA GCGCGGCAGG GGCGGCGGGT GCGCCGACGC CGGCCGCCGT CGATGCGGCC
GAGCGCGCGC GCGTGCTCGA GCTGTTTCGC ACCGAAGACT GA
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| Protein sequence | MTDHTPHSSP PASPTPPQGP APKRRRYFRT LAGLVLGAAI AGGAVGTWTL HRIWTALPSV
EPLAVYRPAL PLRIFSREGE LLAEYGVERR EFVPLDRIPP LVRHALLAAE DAQFYTHGAV
DIGGLARATV ANVVTGQPGQ GGSTITMQVA RNFFLTREKV LSRKLAEILM SYKLERAYSK
DKLLELYMNE IYLGERAYGF AAAASVYFGK PLDALTPGEA AVLAGLPKAP SAFNPVVNPA
RATMRRNYVL GRMRALGYLD EAAYRQAADA PIALATTPPP GILAAPYVAE RARRMMVERF
HDDAYTLGLD VTTTIAMREQ RAADAALARG LAQVGRRDAK DALEGALVSI DAATGDILAL
VGGADFSHNV FDHALQAYRQ PGSSFKPFVY SAALEKGMFP GVLIDDTQRT LSRDETGANP
WRPRNFGNHY EGFIPVRRGL MRSKNLVAVS LMQVARPDFV QQHAARFGFE PLRNPASLPL
ALGAGSATPL EVASAYGVFA NGGVRMEPRL IESVRQRHGG ALFDAQPAPG VRVISARNAF
VMDSMLRDVV AHGTARRAVA LKRADAAGKT GTSNGSKDVW FAGYSSGVVS VVWMGYDAPR
SLGRATGSSA ALPVWVDYMK TAVDGRGAIE RTPPADVALV DGDFVYAEYA NGDKCAPSLP
PFVRSPFACG AARGAPADGG APASAAGAAG APTPAAVDAA ERARVLELFR TED
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