| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0301 |
|---|
| Symbol | |
|---|
| ID | 4905453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 291062 |
|---|
| End bp | 292066 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640143408 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_001074344 |
|---|
| Protein GI | 126457601 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0446618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGCATCG CGCTCGCCGC GGCCGTTCGC GCGACGATCG ACGAATCGCG CGATCCGCAC
GCGAAACGCA TCGACGCGCC GGGCAGCGTG CTGTTCGGCG CGGCGCTCGC GCTCGGCATC
TGGGCGCTGA TCGACGCGCC GTCGCACGGC TGGACCGCGC CCGGCACGCT CGCGCGCTTC
GCGGCGAGCG CGGCGCTCGG CGCGGCGTTC GTCGCCGCCG AGCGCTGGCA GCGGCGCCCG
ATGATCGATC TCGCGCTGTT TCGCACGCCG CGCTTCGTCG GCGCGCTGCT CGCGATGTTC
GGCTACGCGG CGTGCGCGCA GGTGATGATG ACGTTCCTGC CGCTCTATCT GCAGATCGGC
TTCGGGATGT CGGCGATCGA CGCGGGGCTC GGCATGCTGC CGTTCGCGCT CGCGATGATC
GTCGGGCCGT CGCTCGGCGC GGCGCTGTCG GCGCGCGCGC CGGCCGCGAC CGTGCTCGGC
TGCGGGCTCG CGCTGATCGG CATCGGCAAT TTCGCGACCG CCGCGCTCGC CGGCGCGTCG
CACTACGGTC TCGTCGCGCT CGGGATGATG ATCACCGGCT GCGGCGCGGG CATCCTCAAC
GGCGACACCC AGAAGGCGAT CATGGCGTGC GTGCCGCCCG AGCGCACCGG CATGGCGTCC
GGGATCAGCA CGACGACGCG GTTTTCCGCG ATCGTGACGT CGGTCGGCGT GCTCGGCGCG
GTGCTCGCCG AGCAGACCCA CGCGGCGCTC GCCGCACGCG TTGCGCATGC GCCGGCATTG
CTCGGCGCGC TCGATCCGCA CTTCATGTCG AGCCTGCTCG CGGGCGATCT CGCGCAGGCG
ATACGCGGCC TGCCGCCGCG CACCGGCGCG ACGCTCGCGC ACATCGCGCC CGGCGGCTTC
GCGAGCGGTT TTTCGCTCGC GCTGTGCGCG AGCGGCGCGT TCGCGCTCGC GGCGGCCGTG
GCGGTGCGGC TGCTCGTCGG CGCGCAGCCG GGGCGCGCCG CATGA
|
|---|
| Protein sequence | MCIALAAAVR ATIDESRDPH AKRIDAPGSV LFGAALALGI WALIDAPSHG WTAPGTLARF
AASAALGAAF VAAERWQRRP MIDLALFRTP RFVGALLAMF GYAACAQVMM TFLPLYLQIG
FGMSAIDAGL GMLPFALAMI VGPSLGAALS ARAPAATVLG CGLALIGIGN FATAALAGAS
HYGLVALGMM ITGCGAGILN GDTQKAIMAC VPPERTGMAS GISTTTRFSA IVTSVGVLGA
VLAEQTHAAL AARVAHAPAL LGALDPHFMS SLLAGDLAQA IRGLPPRTGA TLAHIAPGGF
ASGFSLALCA SGAFALAAAV AVRLLVGAQP GRAA
|
|---|
| |