| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0291 |
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| Symbol | prpF |
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| ID | 4906281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 283193 |
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| End bp | 284383 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640143398 |
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| Product | AcnD-accessory protein PrpF |
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| Protein accession | YP_001074334 |
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| Protein GI | 126458213 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.369518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCACG TACCTCAAAT CAAGATTCCC GCGACCTACC TGCGCGGCGG CACCAGCAAG
GGCGTGTTCT TCCGGCTGCA GGATCTGCCC GAGGCCGCGC GAACGCCGGG CGCCGCGCGC
GACGCGCTGC TCTCGCGCGT GATCGGCAGC CCCGACCCGT ACGGCAAGCA GATCGACGGC
ATGGGCGGCG CGAGCTCGAG CACGAGCAAG ACGGTGATCG TCTCGAAGAG CGCGCGGCCC
GATCACGACG TCGACTACCT GTTCGGTCAG GTGTCGATCG ACAAGCCGTT CGTCGACTGG
AGCGGCAACT GCGGCAACCT GTCGGCGGCC GTCGGCCCGT TCGCGATCGC GGGCGGCCTG
ATCGACCCGG CGCGCGTGCC GGAGAACGGC GTCGCGACCG TGCGGATCTG GCAGGCGAAC
ATCGGCAAGA CGATCGTCGC GCACGTGCCG ATCACGAACG GCGCGGTGCA GGAGACGGGC
GATTTCGAGC TCGACGGCGT GACGTTCCCG GCCGCCGAGG TGCAGCTCGA ATTCATGGAC
CCGGCCGCCG ACGAGGACGG CGCGGGCGGC GCGATGTTCC CGACGGGCAA CCTCGTCGAC
GATCTCGACG TGCCGGGCGT CGGCACGCTG AAGGCGACGA TGATCAACGC GGGCATTCCG
ACGATCTTCG TCGACGCCGC GGCGATCGGC TACACCGGCA CCGAGCTGCA GGACGCGATC
AATTCGGACG CGAAGGCGCT CGCGATGTTC GAGACGATCC GCGCGCACGG CGCGCTGCGC
ATGGGCCTCA TTGCGTCGCT CGACGAGATC GCGACGCGCC AGCACACGCC GAAGGTGGCG
TTCGTCGCGA AGCCGGCGGA TTACGTCGCG TCGAGCGGCA AGCGCGTCGC GGCGGCCGAC
GTCGACCTGC TCGTGCGCGC GCTATCGATG GGCAAGCTGC ATCACGCGAT GATGGGCACG
GCGGCGGTGG CGATCGGCAC CGCGGCGGCG ATTCCGGGCA CGCTCGTGAA TCTCGCGGCG
GGCGGCGGCG CGCGCCACGC GGTGCGCTTC GGCCATCCGT CGGGCACGCT GCGCGTCGGC
GCGGAGGCGA AGCGGGACGG CGGCGAGTGG GTCGTCACGA AGGCGATCAT GAGCCGCAGC
GCGCGCGTGC TGATGGAGGG CTGGGTGCGC GTGCCGGGCG ACGCGTTCTG A
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| Protein sequence | MAHVPQIKIP ATYLRGGTSK GVFFRLQDLP EAARTPGAAR DALLSRVIGS PDPYGKQIDG
MGGASSSTSK TVIVSKSARP DHDVDYLFGQ VSIDKPFVDW SGNCGNLSAA VGPFAIAGGL
IDPARVPENG VATVRIWQAN IGKTIVAHVP ITNGAVQETG DFELDGVTFP AAEVQLEFMD
PAADEDGAGG AMFPTGNLVD DLDVPGVGTL KATMINAGIP TIFVDAAAIG YTGTELQDAI
NSDAKALAMF ETIRAHGALR MGLIASLDEI ATRQHTPKVA FVAKPADYVA SSGKRVAAAD
VDLLVRALSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGARHAVRF GHPSGTLRVG
AEAKRDGGEW VVTKAIMSRS ARVLMEGWVR VPGDAF
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