Gene BURPS1106A_A0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0200 
Symbol 
ID4903693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp186631 
End bp189279 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content68% 
IMG OID640143307 
Productputative glucan 1,4-alpha-glucosidase 
Protein accessionYP_001074243 
Protein GI126457000 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3387] Glucoamylase and related glycosyl hydrolases 
TIGRFAM ID[TIGR01535] glucan 1,4-alpha-glucosidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCAA GGCACTTCGG ATTCAAGCAG GCGGTGCTGG TGGGCAGTCT GGCCGCGCTC 
GCGGGCGCGG CGGCCCTACC GGCGAATACT TCGGCCGCCG CCGAAGCATT CGGCTCGCCC
GGCGCCGCGC CCGTGCGGGG CCCGGCGGCC AAGTCGTTCC TCGGCACGGC GGTCAACGGC
GCATCGCGGG TGTACTTCAC CGGTTATCGC GGCATCCTGT CCGAGGTCTA CTACCCGGTC
CTCGATACGC CCGAGTCCGT CGACCTGCAG TTCCTCGTCG GCGACGCCGG CAAGACCTTC
GTCGACGAAG AAAAGCAGCA GGCCTACTCG GCCGCGCAAA CGGACACGCG CACGATGAGC
TGGCAGGTGA CGACCGGCAA CAGTTCGCAC AACTGGCAAA TTCGCAAGAT CGTCTTCGCT
GATCCGAACC ACAACGCGAT CGTGCAGCGC GTCACGTTCA CCGCGCTCAA CGGCCGCAAG
GTGGGCGACT TCAATCTCTA CATGCTGTCC AAGCCGTACC TCGACAACGC CGGCGCCAAC
AATACCGCGC AAACGGTGTC CGGCAGCGGC GGCACCGCGC TCGTCGCGAA TCACAACAGC
CGCTATTCGG CGCTCGTCGC GAGCCGCCCG TGGAAGGTGG TCAACGGCGT GGGCATGACG
TCGAACGGCT TCGTCGGGCA GAGCGACGGC TGGACCGACC TGCTCGGCGG CACCGCCGAC
AAGACGATGG ACTGGACCTT CTCGTCCGCG ACCAACGGCA ACGTCGCGCA GATGGGCTGG
CTCGACCTCG GCGATCCGAG CGCGACGAGC GTGTCGTTCG ACGTCGTGCT CGGCTTCGGC
GGCACGCAGG ACCAGGCGCT CGGCGACGCG AACACGGTGC TCGGCAGCGA TCTCGCCGGC
GAGCAGCAGC AGTACGACAC CGGGTGGCAT AACTATGCGG CGGGCCTGTC GTCGCAGAAC
GGCGCCGCGG ACGACGGCTA CTACCTGGCC GCGATGACGC TCAAGACGAT GCAGGACAAG
AGCAACGGCG CGATGATCGC CGGCATCGGC ACGCCGTGGG GCGAAACGCA GGGCGATGCG
AACGCGGGCG GCTATCACCT CGTGTGGCCG CGCGACCTGT TCAAGTTCGC GAACGCGCTG
ACGACGGCGG GCGACACGTC GAGCGCGACG AGCGTCGTCA ACTACCTGTT CAACACGCTG
CAGCAGACAA CCGATTGCGG CACCGCCGAA TACAACGCGC CCGGCTGCGC GCAGGGCTAC
AGCCGCGTCG GGCGCTTTCC GCAGAACGCA TGGGTGAACG GCTGGCCGTA CTGGCAGGGC
ACGCAGATGG ACGAGCAGGC GATGCCGATC ATCCTCGCGT GGCGCCTCGG CCCGAGCGTG
TTCAATCCGC TGTGGCCGAA GATCAAGCTC ACCGCCGACT ACATCGTCAA TACCGGCCCC
TGGACGTACC AGGAGCGCTG GGAGGAGAAC GCCGGCTATT CGCCGTCGAC GATCGCCGCC
GAGATCGCGG GCCTCGTCAC GGCGGCCGAC ATCGCGACGC AAAACGGCGA CACGGCGAGC
GCCGCGCGCT ACCTCGCCGC GGCCGACTAC TGGCAGGAGA ACGTCGCGGC GTGGACGTAC
ACGTCGAGCG GCGCGTTCGG CAACGGCAGC TACTACATCC GGATCAATCC GGCGGGCCGC
GCGGGCACCG GCACCGACCG CGCGAGCTTC GCGCCGACCG CCGGCCCCGA CACGCCGCAG
ACGCTGAGCG TGAAGAACGG CGGCGGCAGC CACGACGCGC GGCGAGTCGT CGACGGCGGC
TTCTTCGAGC TCGTCCGGAT GGGGGTCAAG CGCGCGACCG ATCCGACGAT CGCCAACACG
ATCTCGGTCT ACGACAGCGT GCTCGGCCAG ACGCTGAACG TCGCGAACGC GCCGGCGCTG
TCGCCGAACG CGTGGTTCCG CTACAACTTC GACGGCTACG GCGAGCACAA CGACGGCGGC
GATTTCGACG GCACCGGCGC CGGCCGGCTA TGGCCGATCT TCACCGCCGA GCGCGGCATG
GTCGAGATCG CGCGCCAGGG CAGCGGCGGC GCGGGCAGCG CGTACTTCTC GACGCTCAAG
CAATTGACGA CGCCCGAGGG CTTCGTGCCG GAGCAGGTGT GGTCGAATTC GACGACGCTG
CCCGACGGCT GGGCGGTGAC GACGCCCGCG GGCTACACGC CGGGCCAGCC GACCAAATCG
ATGGCGCCGC TCAACTGGGC GATGGGCGAA TACATCAGCC TGCTCGCGTC GATCCAGGCG
GGGCGCATCG TCGACGTGCC GTCGGTGGTC TGCGCGCGCT ACAACAACTG CGCCGCGCCG
CCGCAAAGCG GGCAGGTGCC GGTGGCCGTC AACGTGAACG CGAGCACGCA GCTCGGCCAG
CAGATGTACG TGACAGGCAA CGTCGCCGCG CTCGGCAACT GGAACACCGA TCTCGGCATT
CCGGTCGATC CGGCCAGCTA CCCGGTGTGG CGCAACACCG TCAACCTGCC GGCCGCTCAG
GCGATCCAGT ACAAGTACTA CCGGAAGAAC GCGGACGGCA GCGTGACGTG GGAGAACCGT
TCCGGCAACC GCCAGCTTCA GACGCCCGCG AGCGGCACGT TGGCGCTGAA CGATCAGGTG
AGCTGGTGA
 
Protein sequence
MSARHFGFKQ AVLVGSLAAL AGAAALPANT SAAAEAFGSP GAAPVRGPAA KSFLGTAVNG 
ASRVYFTGYR GILSEVYYPV LDTPESVDLQ FLVGDAGKTF VDEEKQQAYS AAQTDTRTMS
WQVTTGNSSH NWQIRKIVFA DPNHNAIVQR VTFTALNGRK VGDFNLYMLS KPYLDNAGAN
NTAQTVSGSG GTALVANHNS RYSALVASRP WKVVNGVGMT SNGFVGQSDG WTDLLGGTAD
KTMDWTFSSA TNGNVAQMGW LDLGDPSATS VSFDVVLGFG GTQDQALGDA NTVLGSDLAG
EQQQYDTGWH NYAAGLSSQN GAADDGYYLA AMTLKTMQDK SNGAMIAGIG TPWGETQGDA
NAGGYHLVWP RDLFKFANAL TTAGDTSSAT SVVNYLFNTL QQTTDCGTAE YNAPGCAQGY
SRVGRFPQNA WVNGWPYWQG TQMDEQAMPI ILAWRLGPSV FNPLWPKIKL TADYIVNTGP
WTYQERWEEN AGYSPSTIAA EIAGLVTAAD IATQNGDTAS AARYLAAADY WQENVAAWTY
TSSGAFGNGS YYIRINPAGR AGTGTDRASF APTAGPDTPQ TLSVKNGGGS HDARRVVDGG
FFELVRMGVK RATDPTIANT ISVYDSVLGQ TLNVANAPAL SPNAWFRYNF DGYGEHNDGG
DFDGTGAGRL WPIFTAERGM VEIARQGSGG AGSAYFSTLK QLTTPEGFVP EQVWSNSTTL
PDGWAVTTPA GYTPGQPTKS MAPLNWAMGE YISLLASIQA GRIVDVPSVV CARYNNCAAP
PQSGQVPVAV NVNASTQLGQ QMYVTGNVAA LGNWNTDLGI PVDPASYPVW RNTVNLPAAQ
AIQYKYYRKN ADGSVTWENR SGNRQLQTPA SGTLALNDQV SW