Gene BURPS1106A_A0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0159 
Symbol 
ID4905132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp147315 
End bp150413 
Gene Length3099 bp 
Protein Length1032 aa 
Translation table11 
GC content63% 
IMG OID640143266 
Productresponse regulator/sensor histidine kinase 
Protein accessionYP_001074202 
Protein GI126455824 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.636877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTC TGCGTTCCCG ATCTTGCTTC GCACGCCAAA GTCAACGTCT CGATATGCCA 
GGAAAACTGA AAGAACTGCT GATTCAGCCA TTCAAGCTCA ATCACCGCAA GGCGCTGTTC
GACCCACGAA GGATGCTCGC GCATCAGCGC CTGCTCACAT ATGGCGGCGC AATCGGAATT
TCGGCTTTCA TCCTCTTTTG CCTGCTGCTC ATGATCCGGA TGGAGGCCAT GGACTACGTG
TCGAACGCCC GCTCCGAATT TCTTATTCAG CAATCCAAAC TTACAATAAA ATTACAAATT
CGGCGCACGG CGCTCATGCG AGCCGTGATG CATGCCGAAG GGCTGTGGAA CCGGCGCATC
GAGCCCTCGA CGGAATTGCT TTCGCAATTC GACGCGCATC AGGGCTATGC CGTCCTGCAC
ACGCCGCAGG GCGCGCCGGC CGCGCTCGCC GTCGGCATAC CGGCGCCCGG TCGCTCCGCG
AGCGCGTTCG CGCCGTACCT CGCGCTCCTG GAGACGCAAC TCCTGATGGG GGACGGCCAA
TCGCCGTTGC CGGACGATCG GGTGGAAGGC TACTCGTTCT CGCCCGACGG CACCTACCTG
TCGCTTCTAT GGTCGCGCGA AGACCAGGCT CCCGAGGCAT TCATCGAATC TCATTCGGCA
TCCGGATTGA TCGGCGACGC GATGCGCGGC ATCCGTTATC TTCGCGACGC AAGCACCATC
GTTCCGCTGC GCGCGGATCG ACGAACCGTA TGGCTGCCGC CGCACCCCGA TCCACTCACC
GGCAAGCCCA TGATCCGCAT CGTTCAGCCC GCCATCGACG CGACGGGAAA ACTGTTCGCC
ATCTATGTAC GCAGCCTGCC GCTCGACATG TTTTACCGCA ATCTGAACGA CGCGCCCGCC
GGCAGCACGC TCACGATCGT CGATCGCAAG GGCAACGTCA TCCTGGGTTC GTCGAACCAG
CACGGCGGCG ACGGCGGCGC GACGGCTTCC GCGCTGGGCA TCCGCTCGCT CGGCGACGGC
TTCGGCGGCC TCGTCGAACG TTACCAGGAC GGCATGTTCG TGACCAGTGA TCAGTTGCCC
GGAACCGATT GGGTGCTCGT CCACGCCTAT TCGTGGAAGA CGATCGCGGC CGCATTGGCG
CTGCGCTTTT CCCTCGTAAC GGGGCTCGTG GCGGGCATCA TCGTCATGCT GTGGCTCTTC
GCGATCCAGT TCGACCGCAA GGGCCTCATC CCCAACTATC GCCGCGCCCA ACGGCTGCTG
GAAAGCGAAG TGCTCAATCG CACGATCCTG CGCACCGCCC CCGTCGGGCT TGGCCTGCTC
TCCGCGCAGG ACGGCAGCGT ACTGCTGCAG AACAATGCAA TGCTCGAACT GTCGGCACGC
ACCAGCGACG AACCCCTGCC CATCCGGCTC TGGGAAGCGT ATCGGCATGC GGTCGGCCGG
TCGAGCGACG AAGACGGCGC GCTGCTGCAG CACGATCTCG CGATCGAGCG TGAAGGCGCC
AATCCGGTCT ACCTGCAAGC CAACGTGGTC GCCGCCCGCT ATCGCGGCGC GAACGTCCTG
CTCTGCACGC TGCTGGACAT CTCCCTGCGC AAGGAAAGCG AACTGAAGCT CAAGGAAGCG
CGCATCGCCG CCGATCAGGC GAACAAGGCC AAATCCACGT TCCTCGCCAC GATGAGCCAC
GAAATCAGGA CACCCCTCAA TGCGATCATC GGCAATCTGG AATTGCTGCG AAGGTCCCCG
CTGTCCGAGC AGCAAAGCGA ACGCCTCCAC GTGGTGGAAT CGTGCTCGAA CGCGCTGCTG
CACATCATCA ACGACATACT CGATCTTTCC AAGGTCGAAT CCGGCCAGAT GACGCTCGAG
AACATTCCAT TCGATATCCA CGCGCTACTG CAGGAAACCG TCGACGCCTA TGCGCCGCTC
GCCGAATCAA AGGGCCTCGC GCTCCTTTCG AGTATCGGCG AGGGTGTCGC GAGGCACTAC
ACCGGCGATC CGACGCGCAT CCGCCAGGTC CTGTCGAATT TGATCGGGAA TGCGATCAAA
TTCACGGAAA GAGGGCATAT CTCAATCGAC GTCCATCGTG CGAAGGCGGC CCGGGACGGT
TCCGCGATAG AAATCTGGGT CAACGATACC GGCATCGGAA TACGGCCGGA CCGCATCGCG
ACCTTGTTCG ACGTTTATAC GCAAGCCGAC GCCTCGATCC ATCGCCGCTT CGGCGGATCC
GGTCTCGGAT TGCCGCTCTG CCAGCGGCTC GTGACGATCA TGGGCGGCTC GATCGAAATC
GACAGCCTGC CCGATTTCGG CACCACGGTC ACCGTCGCCC TGCCGCTGCG GGAAGCCCGC
CACGCGACGG CCCTGTCGAA CGGGCCGGCC GCGCGGCGGC GCAATGCAAC GGCGCTCGCC
CGCCCCACGC TGCACGTGCT CGTCGCGGAG GATCACCCGG CCAATCGCGC GCTATTGCGC
GACCAGCTCG AGGCGCTCGA TCATCGGGTG GATGTCGTCG AAAACGGACG CGAGGCGTTG
CGCGCGTTCG GCGAGCATCA ATACGACATC GTGTTGACCG ACCTCGGCAT GCCCGAGCTC
GACGGATATG GCTTCGCGAG GTTCGCCAAC AAGATGCGCG CCGGCACGCC GATTGTCGCG
ATGACCGCCC ATGCGACCGA TGAGGATTAT CAGCGCTCCA AGAAAGTCGG CATCGCCGAA
ATCGTCCTGA AGCCGCTTTC GCTGACCACG CTGGAAAAGG TGCTGCAACG TCACGCGATG
CGCGCGCCCG CGGAGGAAAT CGTCACCGCC GCCGGCCCCG GCCCGGCCCA CGCCGAACCC
CGGATGCGCG CCCTGCCGCC GGCCGTCGCG GCCGCGTTGC GAACGGCAAC GTTGCAATCG
ATCGACAAGA TTGCCCAAGC CCTTGCCGCG CGCAACTTCG AAACGATCCG GCAGGAACTT
CACTCGATCA AGGGAGGATT CGCGTTGACG GGAAACCGCC TCCTCATCGC GCGCTGCGCC
GCCACCGAGG AGTTGGCCGA AGCCGAGGAT CTGGATACGT TGCGCCCCGC CTGGCGAAAG
CTGGAAGCGT CGCTCCTCGA GGCGCTGGAG CGCCTGTAG
 
Protein sequence
MKRLRSRSCF ARQSQRLDMP GKLKELLIQP FKLNHRKALF DPRRMLAHQR LLTYGGAIGI 
SAFILFCLLL MIRMEAMDYV SNARSEFLIQ QSKLTIKLQI RRTALMRAVM HAEGLWNRRI
EPSTELLSQF DAHQGYAVLH TPQGAPAALA VGIPAPGRSA SAFAPYLALL ETQLLMGDGQ
SPLPDDRVEG YSFSPDGTYL SLLWSREDQA PEAFIESHSA SGLIGDAMRG IRYLRDASTI
VPLRADRRTV WLPPHPDPLT GKPMIRIVQP AIDATGKLFA IYVRSLPLDM FYRNLNDAPA
GSTLTIVDRK GNVILGSSNQ HGGDGGATAS ALGIRSLGDG FGGLVERYQD GMFVTSDQLP
GTDWVLVHAY SWKTIAAALA LRFSLVTGLV AGIIVMLWLF AIQFDRKGLI PNYRRAQRLL
ESEVLNRTIL RTAPVGLGLL SAQDGSVLLQ NNAMLELSAR TSDEPLPIRL WEAYRHAVGR
SSDEDGALLQ HDLAIEREGA NPVYLQANVV AARYRGANVL LCTLLDISLR KESELKLKEA
RIAADQANKA KSTFLATMSH EIRTPLNAII GNLELLRRSP LSEQQSERLH VVESCSNALL
HIINDILDLS KVESGQMTLE NIPFDIHALL QETVDAYAPL AESKGLALLS SIGEGVARHY
TGDPTRIRQV LSNLIGNAIK FTERGHISID VHRAKAARDG SAIEIWVNDT GIGIRPDRIA
TLFDVYTQAD ASIHRRFGGS GLGLPLCQRL VTIMGGSIEI DSLPDFGTTV TVALPLREAR
HATALSNGPA ARRRNATALA RPTLHVLVAE DHPANRALLR DQLEALDHRV DVVENGREAL
RAFGEHQYDI VLTDLGMPEL DGYGFARFAN KMRAGTPIVA MTAHATDEDY QRSKKVGIAE
IVLKPLSLTT LEKVLQRHAM RAPAEEIVTA AGPGPAHAEP RMRALPPAVA AALRTATLQS
IDKIAQALAA RNFETIRQEL HSIKGGFALT GNRLLIARCA ATEELAEAED LDTLRPAWRK
LEASLLEALE RL