| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0138 |
|---|
| Symbol | |
|---|
| ID | 4906147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 121132 |
|---|
| End bp | 122490 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640143245 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001074181 |
|---|
| Protein GI | 126456681 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGA TGAGTTGGCA TAACAAAGTG GTGTGGAACG AAGGACTGTT TCTTCTTCCC
CAGCTGTTTC AACAACAGGA ACGGTATTTC GAATATTTCG CGCACAAGCG GGCCGCGGTC
CTCAGCCCGT TTTTCTGGGG ATTCAGCCGA TACGAAATCG ATCAGGAGTC GCTATCGTTC
GGCAAGCTCG TGTTCAAGAG CGGTGCGGGA ATATTTCCCG ACGGAACGCC GTTCGACGTG
CCGGGGCACA CGCCGCCGCC GCCGCCGCTG ACGATCGCCG CCGAGCATCA GGATCAGGTG
ATTTATCTCG CGGTGCCGCT GCGTCTACCG AATACGGAGG AGACCGCGTT CGACGAACAA
GCGGGATCGC TTGCGCGCTA TTCGGCGTTC GAGATCGAAT TGCGCGACAG CAATGCGATC
GGTCAAGGGC CCAAGCCGGT ACAGCTCGCG AACATGCGGC TGCGCCTGCT GCCGGAAAAG
GAGCTGACGC AGTCCTGGAT CGGTATTGCC TTGACGCGCG TGAAGACGCT TCACGCCGAC
GGCTCGGTCG CGCTGTACGA CGGTGACCAC ATCCCGCCCG TCAGCCAGTA CGGAGCGAAC
CCGCTGCTGC GCGAATGGGC GACCCAGTTG CACGGCCTCG CGAAACTGCG AGCCGACGCG
CTGGCGACGC GCCTGTCCGG CAGCGATGGC CGGGCCGGGG CGGCGGCCGA GGTGGCGGAT
TATTTGTTGC TGCAGGTGCT GAACCGGTAT GAACCGCTGC TCGAGCACAT CTGCAGGATT
CGCGAAATGC CGCCCGTCAC GCTCTATCGC GAGCTGTCGA TGCTGGCAGG CGAATTGTCG
ACGTTCGTGC GCCCGCAAAC GCGCCGTCCG CGGCCGACGC CCGGTTACGA TCATGCGCAG
TTGTATGCGA GCATTCGCCC GCTGGTCGAC GAGGTGCACT ACCTGTTGAA CCAGGTTCTG
ATTCGAGGCG CGCAGCCGAT CCCGCTCACC GAGCAGCCGC ACGGCATTCG CGTGGCCACG
ATGTTGCCGT CGGAACTCGC GGGCTATTCG AGCCTCGTGC TCGCCGTGGG CGCGCAAATG
TCGCCGGACG TGTTGCAGCA GCAGTTCGCA TCCCAAACGA AGATCAGCCA TCCGCAGCGG
CTGCCGGAGC TCATTCGCTC TCATTTGCCG GGCATGACGA TGATTCCGTT GCCGGTGCCT
CCGCGGCAGA TTCCGTTCAA TTCCAGCTAT ATCTATTACG AGCTATCCCG CACGGGGCCG
TTCTGGGAAC AGATTGCGCA ACAAGGCGGG CTGGCGATGC ACATCGCGGG CCACTTCCCT
GAACTCAAGC TCGAACTTTG GGGAGTGCGT CACAAATGA
|
|---|
| Protein sequence | MIAMSWHNKV VWNEGLFLLP QLFQQQERYF EYFAHKRAAV LSPFFWGFSR YEIDQESLSF
GKLVFKSGAG IFPDGTPFDV PGHTPPPPPL TIAAEHQDQV IYLAVPLRLP NTEETAFDEQ
AGSLARYSAF EIELRDSNAI GQGPKPVQLA NMRLRLLPEK ELTQSWIGIA LTRVKTLHAD
GSVALYDGDH IPPVSQYGAN PLLREWATQL HGLAKLRADA LATRLSGSDG RAGAAAEVAD
YLLLQVLNRY EPLLEHICRI REMPPVTLYR ELSMLAGELS TFVRPQTRRP RPTPGYDHAQ
LYASIRPLVD EVHYLLNQVL IRGAQPIPLT EQPHGIRVAT MLPSELAGYS SLVLAVGAQM
SPDVLQQQFA SQTKISHPQR LPELIRSHLP GMTMIPLPVP PRQIPFNSSY IYYELSRTGP
FWEQIAQQGG LAMHIAGHFP ELKLELWGVR HK
|
|---|
| |