| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0112 |
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| Symbol | ctaD |
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| ID | 4905902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 99001 |
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| End bp | 100575 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640143219 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001074155 |
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| Protein GI | 126456528 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACG TGCGCGACGC CGCGCATCAT GCCCCAACCG GCTGGCGCCG CTGGTTGTTC
GCGACGAATC ACAAGGACAT CGGCACGCTG TATCTGCTGT TCTCGATCGT CAACCTGATG
ATCGGCGGCG TGATGGCGCT GATGATTCGC GCCGAGCTGT TCGAGCCCGG CCTGCAACTG
ATGCGCCCGG AATTCTTCAA TCAGCTGTCG ACCGAGCACG GCTTCATCAT GATCTTCGGC
GCGATCATGC CCGCGTTCGT CGGCCTCGCG AACTGGATGA TCCCGCTGCA GATCGGCGCG
TCCGACATGG CGTTCGCGCG GATGAACAAC TTCAGCTTCT GGCTGCTGCC GGTGTCGAGC
GCGCTGCTGA TCGGCTCGTT CTTCGTGCCG GGCGGCGCGC CGGCGGCCGG CTGGACGATG
TACGCGCCGC TGTCGACGCA GATGGGCCCG GGCATGGATC TGTCGATCTT CGCGATCCAC
ATCGCCGGTG CATCGTCGAT CATGGGCGCG ATCAACATCG TCGTGACCGT GGTCAACATG
CGCGCGCCCG GCCTCACGCT GATGAAGATG CCGATGTTGG CGTGGACATG GATCATCACG
TCGTTCCTGC TGATCGCGAT CATGCCGGTG CTCGCGGGCG CGGTAACGAT GGTGCTGTTC
GACCGGCATT TCGGCACGTC GTTCTTCAAC GCGTCGGGCG GCGGCGATCC GGTGCTGTAC
CAGCACATCT TCTGGTACTT CGGCCATCCC GAGGTCTACG TGATGATCCT GCCCGGCTTC
GGAATGATCT CGCAGGTGAT TCCCGCGTTC TCGCGCAAGC CGCTGTTCGG CTATGCATCG
ATGGTGTACG CAACCGCGTC GATCGGCATC CTGTCGTTCA TGGTCTGGGC GCACCACATG
TTCGTCACGG GAATGCCGGT GGCGGGCCAG TTGTTCTTCA TGTACGCGAC GATGACGATC
GCCGTGCCCA CCGGCGTGAA GGTGTTCAAC TGGGTCGCGA CGATGTGGCG CGGCTCGCTC
ACGTTCGAGA CGCCGATGCT GTTCTCGATC GGCTTCATCT TCGTGTTCCT GATCGGCGGG
CTGACGGGCG TCACGCTCGC GATGGCGCCG CTGAACGTCG CGCTGCACGG CACCTATTAC
ATCATCGCGC ACTTCCACTA CGTGATGGTG GCCGCATCGC TGTTCAGCAT CTATGCGGGC
TGGTACTTCT GGGTGCCGAA GTGGACCGGC TATTTCTACG ACGAGCGGCG CGGCAGGATT
CACTTCTGGG GGTCGATGAT CTCGTTCAAC GTCACGTTCT TCCCGATGCA CTTCCTCGGC
CTCGCGGGCA TGCCGCGCCG CTATGCGGAC TACCCGGCGC AATTCACCGA CTTCAATCAG
ATCGCGACGA TCGGCGCGTT CGCGTTCGGG CTGATGCAAG TGTACTTCCT GTTCTGGGTC
GCGCTGCCGA CGTACCTCGG CAAGACGCGC CGCTGCGTCG ACGCGAAACC GTGGGACGGC
GCGCAGGGGC TCGAATGGAC GCTGCCGAGC CCAGCGCCGT ACCATTCGTT CGAAACGCCG
CCGGCCGTCA AATGA
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| Protein sequence | MPHVRDAAHH APTGWRRWLF ATNHKDIGTL YLLFSIVNLM IGGVMALMIR AELFEPGLQL
MRPEFFNQLS TEHGFIMIFG AIMPAFVGLA NWMIPLQIGA SDMAFARMNN FSFWLLPVSS
ALLIGSFFVP GGAPAAGWTM YAPLSTQMGP GMDLSIFAIH IAGASSIMGA INIVVTVVNM
RAPGLTLMKM PMLAWTWIIT SFLLIAIMPV LAGAVTMVLF DRHFGTSFFN ASGGGDPVLY
QHIFWYFGHP EVYVMILPGF GMISQVIPAF SRKPLFGYAS MVYATASIGI LSFMVWAHHM
FVTGMPVAGQ LFFMYATMTI AVPTGVKVFN WVATMWRGSL TFETPMLFSI GFIFVFLIGG
LTGVTLAMAP LNVALHGTYY IIAHFHYVMV AASLFSIYAG WYFWVPKWTG YFYDERRGRI
HFWGSMISFN VTFFPMHFLG LAGMPRRYAD YPAQFTDFNQ IATIGAFAFG LMQVYFLFWV
ALPTYLGKTR RCVDAKPWDG AQGLEWTLPS PAPYHSFETP PAVK
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