| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0101 |
|---|
| Symbol | |
|---|
| ID | 4903578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 91141 |
|---|
| End bp | 93381 |
|---|
| Gene Length | 2241 bp |
|---|
| Protein Length | 746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640143208 |
|---|
| Product | Type V secretory pathway, adhesin AidA |
|---|
| Protein accession | YP_001074144 |
|---|
| Protein GI | 126457559 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAA TCAACGATCA GTGTTTCACC GCCGCCCGCG GGGCGGGCGT GACGATGGCG
AATCGGCCCG GCGACCGGCC CGTGCCGATT CCGCGCGATC TGCCGGGCGT GGTGATCTTC
ATCCACGGCG TCAACGATCC CGGGGCGGCT TATGCCACCG TGGAGCGCGG GCTGTGCCAG
GGGCTCAATG AGCGCTTGTC GCGAAGCGAT CTGCGGCCGG GGGCGTATGG CAGGCGGTAT
GCGGCTGCGT CGGCGGCGAA AGCCGAGGGC GATAGCGTTC GGTATGCGGA AGTGCTGGGC
GATCCGGACA TGTATCTGTA TCAACGTGCG GAGACCGGCG GTACTCACAG CATGTTCCTG
CCGTTCTACT GGGGCTATCG GGCGTCCGAT GACGAGATCG CGAAGATCAG CCATCCGGGC
GAGGTCAAGA GCCGCGTGGC GGACAGCGAC GGCAACCTGA TGACGCGCGG CCAGTATCAG
GACATCCACG GCAACCGGCT CGACGCCCAT TTCGGCAAGG GCGGCGGGTT TTTCGCCAAC
GCGACGAACA ACATCCCGCA GATGTACAGC CCGGGCTTCG AACCGGACAA GCTCGAGCGC
ACGGTCATGC AAAACGCGCT GGCCGGCAAT ACGATCTTCG CCGGCAAGTC GCCCGAGCGC
CGTTACTTCG TGCTGGCCGC GGCTCGCCTG GCGAATCTCA TCAAGACCAT TCGGACCATT
CAGCCCTCCG CGCTCGCGCT CGAACATGGA ATGGACCCTC AGCACGAAAC GATCACGGTG
ATGGGGCACA GCCAGGGCAC GATCATCACG CTGCTCGCGC AGGCGATGCT CAGGCAGCAA
GGGCAGCGCT GCGTCGATTG CATCATCATG GTCGATACGC CGTACAGCCT GCAGTTCACC
CAGGACGGCA GCCAGCAAAC CGGGCACGCG AAGCTCAAGA CGCTGGTCGA CATCGTCAAC
GCGGTGACGA GCGAGCCGCA TACGATTCCG GAGCTGGCCG AACTGATGAT CGATTCGGCC
CATTCGTGCG GCCGGGCCGG ACAGAACTGG AGCAAGACGC AGGGAAAGCG GCCGGACAAG
GGCGGCAAGC ACTGGATCAC GTTCGACGAG CGCGACAACC GCGGCAAGGT CTATCTGTAC
TTTTGCCCGG AAGATACCGT GGTCGGCCTC GACAAGGTGC GGGGGATCGG CACGTTCGGC
GTGCCCGACG AGGTGCCGGC CGATGGCGCG GCGGCCAGCC GGGGCAAAAC GATGCCCGCG
ATGACGGTGC TTGAGCCGAA GCGCTTCTTT CAGCGCATGT GGACGCGGCT CGAGCGCGAC
CAGGACGGCA GGGGGAAGCG CTCGAAGGTC GCCGTCGGCA CGCCGCCCGC GCGCGTGCCG
GTTCGCGACC CGTTTCAGCG ATTGACGCCG GGCCCCGACA CGGACGGCAC GATGCTTGGC
ACCTTGGTCG AATCCGGCAA GAACATGGCG CTGCAGGCAT CGTTCAAGCG CAACGACATT
CGCTTCATCA ACGGCGAGCA ACTGAAACCG GCGTACGAGC CCGATCTGTA CGGGGGCGAG
GTTCAGAAAG GCGGACAGGT GCCCGGGCAC GCCGATGTCG CCGGGTTGAT GCGTCCGGAC
GACGTGACGA AAAACGTCGC GCTCGGCAAC CAGTACGCGA AGTTCAAATG GAAAGACGTC
GCGACGACGG ACGATCCGGG CGCCGGCATC GAGCCGCACA AGCAGGCATT CAATCGCGGC
CGTCCGGTCG ACGAGCAGTC GCATAACTGG CGCATCGTGC CGAGCCGGTC GCTCGGCTCG
ATGCTGTCGG CGGCCGCCAC GGGCGGACGG TATCAGACGT ACGTGATCCA GCGCGAGGAG
ACGCCGGACG AGGTTCGCAA GCGCATGCGT ACCGATGCCG ATCAACTGGA AGCGAACAAC
TATCATTCGG GCGTACTGCT CAGTTCGGAG AACCATCGCT GGGTCACGGC GATGGATGTG
GCGATCGGTC AGGCGGTGAC GCTGGATGAT CCGGACTGGC GGCAGTTGTT GCTTTTGATG
GCGGATTGGA AGATGACGCC GGACGTGTAT CGCAATATCC AGAAATGCAA GAACTTTGAG
CGCTTGGACG AACACACGCG CGAATTCGTG AAAGCGTGTG TCGACTACTA CAAGACGGGC
CGATTTCCCG ACGAGAAGTA TGTACCTCTC ACCATGCCAC CGCTCGTGAC CAGCGAACTG
AAGGTTGAGA GCAAAACATG A
|
|---|
| Protein sequence | MNGINDQCFT AARGAGVTMA NRPGDRPVPI PRDLPGVVIF IHGVNDPGAA YATVERGLCQ
GLNERLSRSD LRPGAYGRRY AAASAAKAEG DSVRYAEVLG DPDMYLYQRA ETGGTHSMFL
PFYWGYRASD DEIAKISHPG EVKSRVADSD GNLMTRGQYQ DIHGNRLDAH FGKGGGFFAN
ATNNIPQMYS PGFEPDKLER TVMQNALAGN TIFAGKSPER RYFVLAAARL ANLIKTIRTI
QPSALALEHG MDPQHETITV MGHSQGTIIT LLAQAMLRQQ GQRCVDCIIM VDTPYSLQFT
QDGSQQTGHA KLKTLVDIVN AVTSEPHTIP ELAELMIDSA HSCGRAGQNW SKTQGKRPDK
GGKHWITFDE RDNRGKVYLY FCPEDTVVGL DKVRGIGTFG VPDEVPADGA AASRGKTMPA
MTVLEPKRFF QRMWTRLERD QDGRGKRSKV AVGTPPARVP VRDPFQRLTP GPDTDGTMLG
TLVESGKNMA LQASFKRNDI RFINGEQLKP AYEPDLYGGE VQKGGQVPGH ADVAGLMRPD
DVTKNVALGN QYAKFKWKDV ATTDDPGAGI EPHKQAFNRG RPVDEQSHNW RIVPSRSLGS
MLSAAATGGR YQTYVIQREE TPDEVRKRMR TDADQLEANN YHSGVLLSSE NHRWVTAMDV
AIGQAVTLDD PDWRQLLLLM ADWKMTPDVY RNIQKCKNFE RLDEHTREFV KACVDYYKTG
RFPDEKYVPL TMPPLVTSEL KVESKT
|
|---|
| |