Gene BURPS1106A_A0073 details

Gene Information

• Locus tag: BURPS1106A_A0073
• Symbol: uvrA
• ID: 4905082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 59019
• End bp: 65012
• Gene Length: 5994 bp
• Protein Length: 1997 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640143180
• Product: excinuclease ABC, A subunit
• Protein accession: YP_001074116
• Protein GI: 126457810
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0178] Excinuclease ATPase subunit
• TIGRFAM ID: [TIGR00630] excinuclease ABC, A subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCATCCA GCAATCTGAT CCGCATTCGC GGAGCACGTC AGCACAATCT CAAGCATATC 
GATCTCGACC TGCGCACCGG CGAAATGACG GTCGTCACCG GCCCGTCGGG CTCCGGCAAG 
TCGAGCCTCG TGTTCGACAC CCTGTACGCG GAGGGCCAGC GGCGCTACGT CGAGACCTTC 
AGCGCGTATG CGCGGCAGTT TCTCGACCGG ATGGACCGGC CGCAGGTGGA GCGCGTCGAC 
GGCGTGCCGC CCGCGATCGC GATCGACCAG ACGAACCCCG TGCGCAGCTC GCGCTCGACC 
GTCGGCACGA TGACCGAGCT CAACGATCAT CTGAAGCTCC TGTACGCGCG CGCGGCCGAG 
CTGTTCGATC GCCGGACCGC GCGGCTGGTG CGGCACGACA CGCCGGAGAC GATCTATGCG 
GATCTCTTCG CGCGCACGCA GGCGCACGAC CCGCGCATCG CGATCACGTT CGCCGTCGAA 
CTGCCGGAAA ACGCGTCCGA CGAGGAAGTC GAGCAGTGGC TGTCGGCGAG CGGCTATACG 
CGCGTGCAGG CGCGGCGCGA CGTCGCGTCG CCCACCGGGC CGCGCAAGGT GCTCGACGTG 
GTGGCCGACC GCTTCCGGCT GCATCAGATC GACAAGGCAC GCGCGATCGA GGCGATCGAG 
GCGTCGCTCA AGCGCGGCGG CGGGCGGGTG AGCATCTATG TGCTCGCGCA GGCGCCGGAA 
GGCGCGGACG GCGGCGCGGC ACAGTCTCAG GTGTGGCGTT ACTCCACCGG GCTTCATGAC 
CCGGACAGCG ATCTGCGCTA CGCGGATCCG CAGGCGGCGC TGTTCTCCTT CAACTCGGCG 
TATGGCGCGT GCGAGACGTG CCGCGGCTTC GGCCGCGTGA TCGGCGTCGA TCTCGGCCTC 
GTGATTCCCG ACGCGCGCAA GACGCTGCGC GGCGGCGCCG TCAAGCCGAT GCAGACGCCC 
GCGTGGAAGG AGTGCCAGGA CGACCTGATG CGCTATGCGG CGAAAGCGAA CATCCGGCGC 
GATACGCCGT GGGCGGAGCT CACGCCCGCC GAGCAGGACT GGGTGATCAA CGGCTCGCCG 
GACTGGAACG GCAAATGGCA GAGCCAGTGG TACGGCGTGA AGCGCTTCTT CGGCTATCTC 
GAATCGAAAG CGTACAAGAT GCACATCCGC GTGCTGCTGT CGAAATACCG CAGCTACACG 
CCGTGTGCGG TGTGCGGCGG CGCGCGTCTG AAGACGGAGG CGCTGCTGTG GCGGCTCGGC 
ACGAAGGCGA ACGCCGACGC GGTGCTCGCG AGCGCCGATC GCTTCATGCC GCGCGGCGTC 
GACTGGACCC GCGCGCAGCT CGAGGCGCTG CCGGGCTTGA CGGTGCACGA CCTGATGCTG 
CTGCCGATCG AGCGGATCCG CCGCTTCTTC GACGACATCA GCCTGCCGAG CGCGCTGCTC 
GACGATGCGC TGAAGCTGCT GCTCGCCGAG GTGCGCACGC GGCTGAAGTA CCTGTGCGAC 
GTGGGGCTCG GCTACCTGAC GCTCGACCGG CAGAGCCGCA CGCTGTCGGG CGGCGAGGTG 
CAGCGGATCA ACCTGACGAC GGCGCTCGGC ACGTCGCTCA CCAAGACGCT GTTCGTGCTC 
GACGAGCCGA GCATCGGGCT GCATCCGCGC GACCTGAACC GGATCGTCGA GGCGATGCGG 
CGCCTGCGCG ACGCGGGCAA TACGCTCGTC GTCGTCGAGC ACGATCCGTC GGTGATGCTC 
GCGGCCGACC GGCTGATCGA CATGGGCCCC GGCCCGGGCG AGCGCGGCGG CACGATCGTC 
TACGACGGCA CGCCCGGCGC GATCCGCTCG GCCCGCACGC TGACGGGCGA GTATCTCGGC 
GGCCGCAAGC ACGTCGCGCA CGCGTCGAAC TGGGCGCGCC GGCCGGTGGA CGCGCGCACG 
CCGCGCATCG TGCTCGAGGG CGCGAGCGAG CACAATCTGC GCGACGTCAC GGTCGAGATT 
CCGTTGCAGC GCCTCGTATG CGTGACGGGC GTGTCGGGTT CCGGCAAATC GACGCTGCTG 
CAGGACGTGC TCTATCCGGC GATGGCGCGG CACTTCGGCA AGGCCACCGA ATCGCCGGGC 
GCGTACCGCC GCCTCGCGGG CGCGGAGCAG GTGGGCGACG TCGTGTTCGT CGACCAGTCG 
CCGATCGGCA AGACCACGCG CTCGAACCCG GCGAGCTATG TCGGCGCGTT CGACGAGATC 
CGCAAGCTGT TCGCGAAGGC GCCGCTTGCG CTGCAGCGCG GCTACAGCGC GGGCACCTTC 
AGCTTCAACT CCGGCGACGG CCGCTGCCCG AGCTGCGGCG GCTCCGGCTT CGAGCACATC 
GAGATGCAGT TCCTGAGCGA CGTCTACCTG CGTTGCCCGG ACTGCGACGG CAGCCGCTAC 
CGGGCCGAGA TCCTCGAAGT GCGGATCGAG CGCGGCGGGC GCGCGCTCAG CGTCGCCGAC 
GTGCTCGATC TGACCGTCAG CGAGGCCGCG GCGTGTTTCG CCGCCGACGC CGACGTGCTG 
CGCGTGCTGC AGCCGATCGT CGACGTCGGC CTCGAATACG TGAAGCTCGG CCAGCCGGTG 
CCGACGCTGT CCGGCGGCGA GGCGCAACGC CTGAAGCTGG CGGGCTTTCT CGCGGAATCC 
GCGAAGGCGC GCGACGGGCG CCGCGTCGTC ACGGAAGAGG CGCGCGTCGC GCGGGCGCGG 
CTCTTCATGT TCGACGAGCC CACCACCGGG CTGCATTTCG ACGACATCGC GAAGCTGATG 
CAGGCGTTCG GCAAGCTGCT CGCGAGCGGC CATTCGCTGA TCGTGATCGA GCACAATCTC 
GACGTGATCC GCGCGGCCGA CTGGCTGATC GATCTCGGCC CGGAAGGCGG CGACGGCGGC 
GGCCTCGTGC TGTGCGCGGG CACGCCCGAC GACGTGAAGG CCTGCGCCGG CTCGCATACG 
GGCGCGGCGC TGCTGCAGTA CGAGCGCGCG ATGAACGTCG GGGCCGACGC CGACGCATCC 
GGCGACGCGG GCGTGCCGCT GCAGGCCGCG CTGAACGCGG CGCGCGCGCG CCGCGCGATC 
GAAGGCGAGA ACGTGGTGCG GATCGTCAAT GCGCGCGAGC ACAACCTGAA GGCGCTCCAC 
GTCGACATTC CGCACGGCAA GTTCAACGTG GTGACCGGCG TGTCCGGCTC CGGCAAGTCG 
ACGCTCGCGT TCGACATCCT CTTCCACGAG GGCCAGCGCC GCTACCTCGA ATCGCTGAAC 
GCGTACGCGC GCTCGATCGT GCAGCCGGCC GGGCGCCCCG AAGTCGACGC GGTGTACGGC 
ATTCCGCCGA CGGTGGCGAT CGAGCAGCGG CTGTCGCGCG GCGGCCGCAA GAGCACGGTC 
GCGACGACCT CCGAAGTGTG GCATTTCCTG CGGCTGCTGT ACGTGAAGCT CGGCCTTCAG 
CATTGCATCC ACGACGGCAC GCCGGTGACG TCGCAAACCG TCGAATCGAT CGCCGCGCAG 
TTGCTGCGCG ATCATCGCGG CGAGCACGTC GGGCTGCTCG CGCCGCTCGT CGTCAATCGC 
AAGGGCGTGT ACACGGATCT CGCGAAGTGG GCGAAGGCGC GCGGCAACAC GCACCTGCGC 
GTCGACGGCG AATTCGTGAC GGTGGACCCG TGGCCGAAGC TCGACCGCTT CCGCGAGCAC 
ACGATCGAGC TGCCGGTGGC CGACCTCGTC GTGTCGCCGG ACAACGAGGC CGAGTTGAGG 
CAGCGCCTGG ACGAGACGCT CGAGCTCGGC AAGGGCGTGA TGCATCTGCT CGCGCCGCTC 
GACGGGCTGC GCCATGCGAT GGACAACCGC CTTTGCACCG CCGGCGTCGG CGCGATCAAG 
GTGCTGTCGG TCAAGCGCGC ATGCCCGGTG TGCGGCACGA GCTACCCGGA GCTGGACCCG 
CGGATGTTCT CGTACAACAG CAAGCATGGC TGGTGCACGA CCTGCGTGGG CACCGGCCTC 
GCGCTCACGC GCGAGCAGCG CGCGGCCTAC GACGACACGG TGCTTGCCGA GGACGGCCGC 
GGCCGCGAGC AGACGCTGCC TTCCGACGAG CAGGAGCCGG AGGGCGTCGG TGACGAGCCG 
TGCCCGGATT GCGGCGGCAC GCGGCTGAAC CCGTCCGCGC GCGCGGTGAC TTTCGGCCGC 
CATTCGATCG TCGACGTCGC GCAGTGGACC GTGACGCATA CGCGCCGCTG GATCGAGGGC 
CTGCAGCTCG CCGGGCGGGA CGCGCAGATC GCGCGCGACA TCGTCGGCGA AATCGGCAGC 
CGTCTCGCGT TTCTCGAGGA AGTCGGGCTC GGCTATCTGA GCCTCGATCG CGCGGCGCCG 
AGCCTGTCGG GCGGCGAAGC CCAGCGCATC CGGCTCGCGG CGCAGCTCGG CAGCAACCTG 
CAGGGCGTGT GCTACGTGCT CGACGAGCCG ACGATCGGCC TGCATCCGCG CGACAACCAG 
ATCCTGCTGA GCGCGCTGCG CAAGCTCGGC GACAAGGGCA ACACGCTCGT CGTCGTCGAG 
CACGACGAAG ACACGATTCG CCGCGCCGAT CACATCATCG ACATCGGCCC GGGCGCCGGC 
AGGCGCGGCG GCACGCTGGT CGCGCAGGGC GGGGTCGCGG ACCTGTCCGC GCAGTCGGCC 
TCGGTGACGG GGCGCTTGCT CGCGCAGCCG ATGACGCATC CGCTGCAGCC GCGGCGCAGC 
GTGAATCCGC CGGGCAAGAG GAACGGGCAC GCGGTGCCGC AAGCGTGGCT GACGGTGCAT 
CGCGCCCGGC TGCACAACCT GCGCGACGTC ACGGTCGGCA TTCCGCTTGC GCGGCTCGTC 
GCCGTGACGG GCGTGAGCGG CTCGGGCAAG TCGACGCTCG CGCGCGATGT GCTGATGACG 
AACCTGCTCG ACGCGGTGGG CCGCTCGGTG CTGTCGTCGC CGGCCGCGCG GCGCGCACGC 
AAGGCCGCGC AGCAGGACGC GCCGCGGGCG GCGAAGAGCC GCGCGAGCGT GCTCGCGCGC 
AGCGCCCCGA GGCCCGTGCT GAACGTCACG CATGCGTGGC AAGGCTGCGA GTCGATCAGC 
GGCTGGGAGC ATATCGACCG CGTGCTCGAA GTCGACCAGA CGCCGATCGG CAAGACGCCG 
CGCTCGTGCC CGGCGACCTA CATCGGCGTG TGGGACGCGA TCCGCAGGCT GTTCGCGGAC 
ACGCTGGAGG CGCGCGCGCG CGGCTACACG GCGTCGCGTT TCTCGTTCAA CACCGGCGAA 
GGGCGTTGCC CCGCATGCGA AGGGCAAGGC GTGCGCACGA TCGGCATGAG CTTCCTGCCC 
GACGTGAAAG TGCCGTGCGA CGTGTGCCAC GGGCAGCGTT TCAACCCGGA GACGCTCGCG 
GTGACGTGGC GCGGCCGGAA CATCGGCGAC GTGCTGACGA TGGAGATCGA CGAAGCGGTG 
GAGTTTTTCG CGCCGTTGTC GAACATCGCG CATCCGCTGC AACTGATGAA GGACGTCGGC 
CTCGGTTATC TGACGCTCGG CCAGCCGTCG CCGACGCTGT CCGGCGGCGA GGCGCAGCGC 
ATCAAGCTCG TCACCGAGCT GAGCAAGGTG CGCGACGATG TCACGCGGCG CGGCCAGAAA 
GCGCCGCACA CGCTGTACGT GCTCGACGAG CCGACCGTGG GCCTGCACAT GGCCGACGTC 
GCGAAGCTGA TTCGCGTGCT GCACCGGCTC GTCGACGCGG GGCACAGTGT CGTCGTGATC 
GAGCACGACC TCGATGTGAT CGCGGAGGCG GACTGGATCG TCGATCTCGG CCCGGAGGGC 
GGTGCGGGCG GCGGCACGAT CGTGGCGGCC GCGCCTCCGG AAGGGCTCGT GGAGGTGAGC 
GCAAGCCATA CGGGGCGCGC GCTCGGGGCC GTGCTGGCGC GAACGGGCGC GGACCGGGAC 
GAACCGCTGC GAAGCGGGAC GGCGCGCGCC ATGGAAGCTT CACGTCCAGC ACGGACAGCA 
TCGATTGCAA ACCCGCGGAC ATCCTGTCCG GGTGCCAGGC CACGGCGATC TTGA 

 

Protein sequence

MSSSNLIRIR GARQHNLKHI DLDLRTGEMT VVTGPSGSGK SSLVFDTLYA EGQRRYVETF 
SAYARQFLDR MDRPQVERVD GVPPAIAIDQ TNPVRSSRST VGTMTELNDH LKLLYARAAE 
LFDRRTARLV RHDTPETIYA DLFARTQAHD PRIAITFAVE LPENASDEEV EQWLSASGYT 
RVQARRDVAS PTGPRKVLDV VADRFRLHQI DKARAIEAIE ASLKRGGGRV SIYVLAQAPE 
GADGGAAQSQ VWRYSTGLHD PDSDLRYADP QAALFSFNSA YGACETCRGF GRVIGVDLGL 
VIPDARKTLR GGAVKPMQTP AWKECQDDLM RYAAKANIRR DTPWAELTPA EQDWVINGSP 
DWNGKWQSQW YGVKRFFGYL ESKAYKMHIR VLLSKYRSYT PCAVCGGARL KTEALLWRLG 
TKANADAVLA SADRFMPRGV DWTRAQLEAL PGLTVHDLML LPIERIRRFF DDISLPSALL 
DDALKLLLAE VRTRLKYLCD VGLGYLTLDR QSRTLSGGEV QRINLTTALG TSLTKTLFVL 
DEPSIGLHPR DLNRIVEAMR RLRDAGNTLV VVEHDPSVML AADRLIDMGP GPGERGGTIV 
YDGTPGAIRS ARTLTGEYLG GRKHVAHASN WARRPVDART PRIVLEGASE HNLRDVTVEI 
PLQRLVCVTG VSGSGKSTLL QDVLYPAMAR HFGKATESPG AYRRLAGAEQ VGDVVFVDQS 
PIGKTTRSNP ASYVGAFDEI RKLFAKAPLA LQRGYSAGTF SFNSGDGRCP SCGGSGFEHI 
EMQFLSDVYL RCPDCDGSRY RAEILEVRIE RGGRALSVAD VLDLTVSEAA ACFAADADVL 
RVLQPIVDVG LEYVKLGQPV PTLSGGEAQR LKLAGFLAES AKARDGRRVV TEEARVARAR 
LFMFDEPTTG LHFDDIAKLM QAFGKLLASG HSLIVIEHNL DVIRAADWLI DLGPEGGDGG 
GLVLCAGTPD DVKACAGSHT GAALLQYERA MNVGADADAS GDAGVPLQAA LNAARARRAI 
EGENVVRIVN AREHNLKALH VDIPHGKFNV VTGVSGSGKS TLAFDILFHE GQRRYLESLN 
AYARSIVQPA GRPEVDAVYG IPPTVAIEQR LSRGGRKSTV ATTSEVWHFL RLLYVKLGLQ 
HCIHDGTPVT SQTVESIAAQ LLRDHRGEHV GLLAPLVVNR KGVYTDLAKW AKARGNTHLR 
VDGEFVTVDP WPKLDRFREH TIELPVADLV VSPDNEAELR QRLDETLELG KGVMHLLAPL 
DGLRHAMDNR LCTAGVGAIK VLSVKRACPV CGTSYPELDP RMFSYNSKHG WCTTCVGTGL 
ALTREQRAAY DDTVLAEDGR GREQTLPSDE QEPEGVGDEP CPDCGGTRLN PSARAVTFGR 
HSIVDVAQWT VTHTRRWIEG LQLAGRDAQI ARDIVGEIGS RLAFLEEVGL GYLSLDRAAP 
SLSGGEAQRI RLAAQLGSNL QGVCYVLDEP TIGLHPRDNQ ILLSALRKLG DKGNTLVVVE 
HDEDTIRRAD HIIDIGPGAG RRGGTLVAQG GVADLSAQSA SVTGRLLAQP MTHPLQPRRS 
VNPPGKRNGH AVPQAWLTVH RARLHNLRDV TVGIPLARLV AVTGVSGSGK STLARDVLMT 
NLLDAVGRSV LSSPAARRAR KAAQQDAPRA AKSRASVLAR SAPRPVLNVT HAWQGCESIS 
GWEHIDRVLE VDQTPIGKTP RSCPATYIGV WDAIRRLFAD TLEARARGYT ASRFSFNTGE 
GRCPACEGQG VRTIGMSFLP DVKVPCDVCH GQRFNPETLA VTWRGRNIGD VLTMEIDEAV 
EFFAPLSNIA HPLQLMKDVG LGYLTLGQPS PTLSGGEAQR IKLVTELSKV RDDVTRRGQK 
APHTLYVLDE PTVGLHMADV AKLIRVLHRL VDAGHSVVVI EHDLDVIAEA DWIVDLGPEG 
GAGGGTIVAA APPEGLVEVS ASHTGRALGA VLARTGADRD EPLRSGTARA MEASRPARTA 
SIANPRTSCP GARPRRS