Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0072 |
Symbol | |
ID | 4903569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 57847 |
End bp | 58542 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640143179 |
Product | RNA polymerase sigma factor |
Protein accession | YP_001074115 |
Protein GI | 126458510 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCG AGCCGCGATC GGGCGACATG CAGCCTTCGC GCGTGGACGA CCGCGCGCTG GCCGCGCGGG TTGCCGGCGG CGATCATGCG GCATTCGAGC AATTGATGCG CCGCTACAAC CGGCGCCTCT ACCGGCTTGC GCGCGCGACG TTGCGCGACG ACGCGCAAGC CGAAGACGTG CTTCAGGAGG CCTATCTGGC CGCATTTCGC ACCATCGGGC GCTTTCGCGG CGACGCATCG CTGTCCACCT GGCTGTCGCG CCTCGTGCTC AACGCGTGCT TTACGCGCCA GCGCCGGGGC GCCCGGCGCG ACAACATCGC CCCGATGGTG AATACATCGT CCATCGCCGG CTTCGAGCGC ACTACCATGG ATGCGGACCT AACCTCCTCG CCCGATCATG CACTCATGCG CACGGAGCTG CGTGCATTGC TCGAGCGCAA GCTCGATGCG TTGCCCGAGG CTTTTCGCCT CGTGTTCGTC CTGCGTTGCG TGGAGGAGTT GAGCGTCGAG GAGACCGCGC AGTGTCTCGG CATACCGGAG GCCACCGTGC GATCGCGCCA TTTTCGGGCG AAGCGCTTAC TGCGCGAATC GCTCGCGCGG GAAATCGATT CGGCCGGGCG CGACGTGTTC TCGTTCGCCG GCGAGCGCTG CGACCGCATC GTCCGCGGCG TACTGGCGAG GCTGATTTCG CCCTGA
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Protein sequence | MTTEPRSGDM QPSRVDDRAL AARVAGGDHA AFEQLMRRYN RRLYRLARAT LRDDAQAEDV LQEAYLAAFR TIGRFRGDAS LSTWLSRLVL NACFTRQRRG ARRDNIAPMV NTSSIAGFER TTMDADLTSS PDHALMRTEL RALLERKLDA LPEAFRLVFV LRCVEELSVE ETAQCLGIPE ATVRSRHFRA KRLLRESLAR EIDSAGRDVF SFAGERCDRI VRGVLARLIS P
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