Gene BURPS1106A_A0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0014 
Symbol 
ID4903950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp9800 
End bp10990 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content68% 
IMG OID640143121 
Producttartrate dehydrogenase 
Protein accessionYP_001074057 
Protein GI126457861 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02089] tartrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGGC GATCGCGCAA GCTCCGCGCG ATCGCTTTCC CGACGCCGCC CGCGCCTGGC 
GCGACGACGC GCGCGCGGCA GGATACGAAG GACGAGGACC TCAGCATGAG CGAGAAGGTG
TACAGGATCG CCGTCATCCC CGGCGACGGG ATCGGCGTGG AAGTGATGCC CGAAGGGCTG
CGCGCGCTCG ACGCGGTGAG CCGCCGCTTC GGCTTGCGCT TCGCATACGA GCCGATCGAA
TGGGCAAGCT GCGACTATTA CGCGAAGCAC GGGCAGATGA TGCCCGACGA CTGGAAGACG
CAACTGTCCG GCATGGACGC GCTGCTGTTC GGCGCGGTGG GCTGGCCCGA GACGGTGCCC
GATCACATAT CGCTGTGGGG CTCGCTGATC AAATTCCGCC GCGAGTTCGA TCAATACGTG
AACCTGCGTC CCGCGCGCCT GTTCGACGGC GTGCCGTGCC CGCTCGCCGG CCGCAAGGCG
GGCGACATCG ATTTCATGAT CGTGCGCGAG AACACCGAGG GCGAATACTC GGCCGTCGGC
GGCACGATGT TCGAGGGCAC CGAGCGCGAG TTCGTCGTCC AGCAGGCGGT GTTCACGCGG
CACGGCACCG AGCGCGTGCT GAAGTTCGCG TTCGAGCTCG CGCAGCGCCG CGCAAAGCGG
CTCACCGTCG CGACGAAGAG CAACGGCATC GCGATCAGCA TGCCGTGGTG GGACGCGCGC
GCCGCCGAGA TGGCCGCACG CTATCCGGAC GTCGCATGGG ACAAGCAGCA TATCGACATC
CTGTGCGCAC GCTTCGTGAT GCAGCCGGAC CGCTTCGACG TCGTCGTCGC GTCGAACCTG
TTCGGCGATA TCCTGTCCGA TCTCGGCCCC GCCTGCACCG GCACGATCGG CATCGCGCCG
TCGGCGAACC TGAATCCGGA GCGCAACTTT CCGTCGCTGT TCGAGCCGGT GCACGGGTCC
GCGCCGGATA TCGCCGGCAA GCACATTGCC AACCCGATCG CGATGATCTG GTCGGCCGCG
ATGATGGTCG ATTTCCTCGG CGCCGGCACG GGCCCCGCGC GCGAAGCGCA CGATGCGATC
GTCGCCGCGA TCGAGCACGT GCTGAAGCAT GGCCCGCGCA CGCGCGACAT GGGCGGCCGA
GCATCGACGC GCGAAGTGGG CGACGCAATC GTCGCGCACC TGCTCGGCTG A
 
Protein sequence
MNRRSRKLRA IAFPTPPAPG ATTRARQDTK DEDLSMSEKV YRIAVIPGDG IGVEVMPEGL 
RALDAVSRRF GLRFAYEPIE WASCDYYAKH GQMMPDDWKT QLSGMDALLF GAVGWPETVP
DHISLWGSLI KFRREFDQYV NLRPARLFDG VPCPLAGRKA GDIDFMIVRE NTEGEYSAVG
GTMFEGTERE FVVQQAVFTR HGTERVLKFA FELAQRRAKR LTVATKSNGI AISMPWWDAR
AAEMAARYPD VAWDKQHIDI LCARFVMQPD RFDVVVASNL FGDILSDLGP ACTGTIGIAP
SANLNPERNF PSLFEPVHGS APDIAGKHIA NPIAMIWSAA MMVDFLGAGT GPAREAHDAI
VAAIEHVLKH GPRTRDMGGR ASTREVGDAI VAHLLG