Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0014 |
Symbol | |
ID | 4903950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 9800 |
End bp | 10990 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640143121 |
Product | tartrate dehydrogenase |
Protein accession | YP_001074057 |
Protein GI | 126457861 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGGC GATCGCGCAA GCTCCGCGCG ATCGCTTTCC CGACGCCGCC CGCGCCTGGC GCGACGACGC GCGCGCGGCA GGATACGAAG GACGAGGACC TCAGCATGAG CGAGAAGGTG TACAGGATCG CCGTCATCCC CGGCGACGGG ATCGGCGTGG AAGTGATGCC CGAAGGGCTG CGCGCGCTCG ACGCGGTGAG CCGCCGCTTC GGCTTGCGCT TCGCATACGA GCCGATCGAA TGGGCAAGCT GCGACTATTA CGCGAAGCAC GGGCAGATGA TGCCCGACGA CTGGAAGACG CAACTGTCCG GCATGGACGC GCTGCTGTTC GGCGCGGTGG GCTGGCCCGA GACGGTGCCC GATCACATAT CGCTGTGGGG CTCGCTGATC AAATTCCGCC GCGAGTTCGA TCAATACGTG AACCTGCGTC CCGCGCGCCT GTTCGACGGC GTGCCGTGCC CGCTCGCCGG CCGCAAGGCG GGCGACATCG ATTTCATGAT CGTGCGCGAG AACACCGAGG GCGAATACTC GGCCGTCGGC GGCACGATGT TCGAGGGCAC CGAGCGCGAG TTCGTCGTCC AGCAGGCGGT GTTCACGCGG CACGGCACCG AGCGCGTGCT GAAGTTCGCG TTCGAGCTCG CGCAGCGCCG CGCAAAGCGG CTCACCGTCG CGACGAAGAG CAACGGCATC GCGATCAGCA TGCCGTGGTG GGACGCGCGC GCCGCCGAGA TGGCCGCACG CTATCCGGAC GTCGCATGGG ACAAGCAGCA TATCGACATC CTGTGCGCAC GCTTCGTGAT GCAGCCGGAC CGCTTCGACG TCGTCGTCGC GTCGAACCTG TTCGGCGATA TCCTGTCCGA TCTCGGCCCC GCCTGCACCG GCACGATCGG CATCGCGCCG TCGGCGAACC TGAATCCGGA GCGCAACTTT CCGTCGCTGT TCGAGCCGGT GCACGGGTCC GCGCCGGATA TCGCCGGCAA GCACATTGCC AACCCGATCG CGATGATCTG GTCGGCCGCG ATGATGGTCG ATTTCCTCGG CGCCGGCACG GGCCCCGCGC GCGAAGCGCA CGATGCGATC GTCGCCGCGA TCGAGCACGT GCTGAAGCAT GGCCCGCGCA CGCGCGACAT GGGCGGCCGA GCATCGACGC GCGAAGTGGG CGACGCAATC GTCGCGCACC TGCTCGGCTG A
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Protein sequence | MNRRSRKLRA IAFPTPPAPG ATTRARQDTK DEDLSMSEKV YRIAVIPGDG IGVEVMPEGL RALDAVSRRF GLRFAYEPIE WASCDYYAKH GQMMPDDWKT QLSGMDALLF GAVGWPETVP DHISLWGSLI KFRREFDQYV NLRPARLFDG VPCPLAGRKA GDIDFMIVRE NTEGEYSAVG GTMFEGTERE FVVQQAVFTR HGTERVLKFA FELAQRRAKR LTVATKSNGI AISMPWWDAR AAEMAARYPD VAWDKQHIDI LCARFVMQPD RFDVVVASNL FGDILSDLGP ACTGTIGIAP SANLNPERNF PSLFEPVHGS APDIAGKHIA NPIAMIWSAA MMVDFLGAGT GPAREAHDAI VAAIEHVLKH GPRTRDMGGR ASTREVGDAI VAHLLG
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