| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5777 |
|---|
| Symbol | |
|---|
| ID | 4881474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 6038457 |
|---|
| End bp | 6039134 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640143095 |
|---|
| Product | RNA polymerase sigma factor SigM |
|---|
| Protein accession | YP_001074031 |
|---|
| Protein GI | 126438340 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.302435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.784236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAGCT TCGACGCCGT CGGCCGGTCC GACGCCCAGC TGCTGGCCGA TCATGTCGCG
GGTGACCGCT ACGCGTTCGC GGAGTTGTTC GTCCGCCACC AGCGCCAGCT CGAGCGGCTC
GCGCGGATCA CCAGCAGCAA CCGCGAGGAC GCCGCCGACG CGCTGCAGGA GGCGATGCTC
TCGGCGCACC GCAAGGCCGC GAGCTTCCGC TTCGACTCCG CGGTGAGCAG CTGGCTGTAC
CGCATCGTCG TCAACGCGTG CCTGGACCGG CTGCGCACCA ACCGCACACA CGCCACCAGC
ACGCTCGTCG ACGACGTCGG ATCGGCCGGC GACCCGACGG CCAGGGTGGA CACCGCGATC
GTCATCGAAC GGGCCCTGCT GCGGTTGCCG GTCGAACAAC GCGCCGCGGT CGTCGCCGTC
GACATGCAGG GGTACTCGGT CGCCGAAACC GCCCGGATGC TGGGCGTCGC GGAAGGCACG
GTCAAGAGTC GGTGCAGCCG GGGCCGGGCG AAACTGGCCG AGACATTGCG CGGTCTCGAC
GAGACGGAGA CGGCATCGCC GCCGCCCGCC GGCCGCGGCT GCCACCCGGT GCCGCGGTCG
GCCCGTAGCC GCCGCCGTCC CACTATCGAG CGCGCCGTGC GTCACGCGGG TGGCGGGACA
CCGGTCGACC GGCCGTAG
|
|---|
| Protein sequence | MVSFDAVGRS DAQLLADHVA GDRYAFAELF VRHQRQLERL ARITSSNRED AADALQEAML
SAHRKAASFR FDSAVSSWLY RIVVNACLDR LRTNRTHATS TLVDDVGSAG DPTARVDTAI
VIERALLRLP VEQRAAVVAV DMQGYSVAET ARMLGVAEGT VKSRCSRGRA KLAETLRGLD
ETETASPPPA GRGCHPVPRS ARSRRRPTIE RAVRHAGGGT PVDRP
|
|---|
| |