| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5688 |
|---|
| Symbol | |
|---|
| ID | 4881385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5938596 |
|---|
| End bp | 5940356 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640143006 |
|---|
| Product | amidohydrolase 3 |
|---|
| Protein accession | YP_001073942 |
|---|
| Protein GI | 126438251 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.496605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACC TCAAGATCGT CGGAGGAACC GTGGTCGACG GCACCGGCGC CGACCGGTTC
CGCGCCGACG TGGGCGTCAA GGACGGAAAG ATCGTCGAGG TGCGCCGGGT GCCGCCGGGA
GGCGACGGTC TGGCGGGCGA TGCCGCGGTG ACGCTCGACG CCACCGAACG GATCGTCGCG
CCGGGCTTCG TGGACATCCA TACCCACTAT GACGGTCAGG TCAGCTGGGA CAGTCTGTTG
GAACCGTCCA GTTGCCACGG CGTGACCACG GTGGTCACCG GCAACTGCGG GGTGGGGTTC
GCGCCGGTCC GGCCGGGCAG CGAGGAATGG CTGATCAAAC TGATGGAGGG TGTCGAGGAC
ATCCCGGGAT CCGCGCTGAC CGAGGGCATC TCGTGGGGTT GGGAGAGCTA TCCCGAGTAT
CTGGACGTGA TCGGGTCGCA GCACTTCGCG GTCGACGTCG GCAGTCAGAT CGCGCACGGT
TCGGTGCGCG CCTACGCGAT GGGCGAGCGC GGCGCCCGCA ACGAGCCGGC CACACCCGAG
GACATCGCGG CGATGGCCCA CCTCGTGCGC GAGTCGATCG AGGCCGGCGC GCTGGGGTTC
TCCACCTCCC GGACCATCGC CCACCGGGCC ATGGACGGGG AACCCGTGCC CGGCACCTTC
GCCGCCGAGG ACGAACTGTT CGGTCTCGGC CGCGCCATGG CGGCCGGCGG CCGCGCGGTG
TTCGAACTCG CTCCGCAGGG TGCCGCGGGC GAGGACATCG TCGCGCCGAA GCGAGAACTG
GAGTGGATGC GACGCCTCGG CGCCGAGATC GAACGCCCGT TGTCGTTCGC GTTGATCCAG
GTCGACGCCG ACCCGAACCT GTGGCGCGAA CAGCTCGAGA TCTCGGCCGA CGCCCACGCC
GACGGCGCGA TGCTCTACCC GCAGATCGCC GCCCGGCCAT TCGGCATGCT GCTCGGCTTC
CCCGGCCATC ACGCCTTCAC CCACCGTCCG ACCTACCGCG CGCTCAAGTC GGAACTGCCG
CGTGAGGAGT TGGCAGAACG GCTCGCCGAC CCGGCGGTGA AGGCGGCGAT CCTCGGCGAA
TCCGATCTGC CGGTGGACAC CACCAGACAG TTCGACGGCA TGTTCGCCCT GGTTCAGCAT
TCACTGCATC GCATCTACGC ACTCGGTGAC CCGCCCGACT ACGAACCGAC GCCGGACAGG
ACCGTCGCGT CGATCGCCGC GGACCGCGGC GAGGACCCGT TGGCGACGCT GTACGACCTC
ATGCTCGAAG ACGGTGCGGG CTCGATGCTG ATGTTGCCGT TCTTCAACTA CGCCGACGGC
AACCACGACG CGATCCACGA GATGCTCACC CACCCCGCGG GTGTGTTGGG TCTGTCCGAC
GGCGGGGCGC ACTGCAACCT GATCTGCGAC GCCTCCTATC CCACCTATCT GGTCACCCAC
TGGGCCCGCG ACCGCCACCG CGGTCGCAAA TTGAGCCTCG AGTACGTCTT GCGTAAGCAA
TGCCGGGATA CGGCAACACT TTTCGGGCTC ACCGACCGCG GCACCATCGA GGTCGGCAAA
AGGGCCGACC TCAACGTGAT CGATTTCGAC GCGCTGACCC TGCACCCGGC CCGGATGGCC
TATGACCTTC CCGCGGGCGG GAATCGGCTG GTGCAGGGGG CCAGCGGTTA TGACGCGACG
GTCGTCAACG GCACCGTCAC CCGCCGCTTC GGCCGCGACA CGGGTGCGCG GCCCGGCCGG
TTGGTGCGCG GCGCCCGCTG A
|
|---|
| Protein sequence | MFDLKIVGGT VVDGTGADRF RADVGVKDGK IVEVRRVPPG GDGLAGDAAV TLDATERIVA
PGFVDIHTHY DGQVSWDSLL EPSSCHGVTT VVTGNCGVGF APVRPGSEEW LIKLMEGVED
IPGSALTEGI SWGWESYPEY LDVIGSQHFA VDVGSQIAHG SVRAYAMGER GARNEPATPE
DIAAMAHLVR ESIEAGALGF STSRTIAHRA MDGEPVPGTF AAEDELFGLG RAMAAGGRAV
FELAPQGAAG EDIVAPKREL EWMRRLGAEI ERPLSFALIQ VDADPNLWRE QLEISADAHA
DGAMLYPQIA ARPFGMLLGF PGHHAFTHRP TYRALKSELP REELAERLAD PAVKAAILGE
SDLPVDTTRQ FDGMFALVQH SLHRIYALGD PPDYEPTPDR TVASIAADRG EDPLATLYDL
MLEDGAGSML MLPFFNYADG NHDAIHEMLT HPAGVLGLSD GGAHCNLICD ASYPTYLVTH
WARDRHRGRK LSLEYVLRKQ CRDTATLFGL TDRGTIEVGK RADLNVIDFD ALTLHPARMA
YDLPAGGNRL VQGASGYDAT VVNGTVTRRF GRDTGARPGR LVRGAR
|
|---|
| |