| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5685 |
|---|
| Symbol | |
|---|
| ID | 4881382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5936195 |
|---|
| End bp | 5936776 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640143003 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001073939 |
|---|
| Protein GI | 126438248 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATC CGTCCACCCG CAGCCGGATC CTCGATGCGA CGGCGGAGTT GTATCGCCGG
CAGGGCATGC CCGCCACCGG CCTCAAGCAG ATCTCGGCCG CGGCGCAGGC GCCGTTCGGT
TCGATCTACC ACCACTTCCC CGGTGGCAAA GAGGCGATCA GCGTGGAAGT CATTCGCCGC
GAAGGCATCC GGTACGCCAC GTTCGTCGGC GCGCAGTTGG CGCAGATCGA CCCGCTCGAC
GGAATCCCCG AGTTGTTCGA GAAGGCCGGT AGGGATCTGG AGGCGCAGGA CTACAGCGAA
GCCTGTTCGA TCGAGACGAT CGCGCTGGAG GTGGCCAGCA CCAACGAGCG GCTCCGGGTG
GAGGCGGCGG AGGTGTTCCA GAGCTGGCTC GGCGGCCTCG CGGCGTGGTT CGGGCAACTC
GACCTCACCG AGGCGGAGTG CCGCCGGTTG GCGATGATCA CCCTGACGGC CCTCGAAGGC
GCCTTCGTCC TGTGCCGCAC CCTGCGCTCG GTCGAACCCA TCGTCTGCGC GGGGCACGGG
GTCCGGGCCG CCGTCCACGC GGCGGTTCGA AAGCCTGTCT AA
|
|---|
| Protein sequence | MADPSTRSRI LDATAELYRR QGMPATGLKQ ISAAAQAPFG SIYHHFPGGK EAISVEVIRR
EGIRYATFVG AQLAQIDPLD GIPELFEKAG RDLEAQDYSE ACSIETIALE VASTNERLRV
EAAEVFQSWL GGLAAWFGQL DLTEAECRRL AMITLTALEG AFVLCRTLRS VEPIVCAGHG
VRAAVHAAVR KPV
|
|---|
| |