Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5640 |
Symbol | |
ID | 4881337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 5890647 |
End bp | 5893205 |
Gene Length | 2559 bp |
Protein Length | 852 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640142958 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001073894 |
Protein GI | 126438203 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC CGCTGCTCGA TGATCCGAGC GATCTGTCCA CCCTGCGCGC GAAGGGTGAG GATCCCGACG AGCTGTTCGC CTCCTTCGCC GCGTGGGCCG AGGCGGGCGG CACCGCGCTG TATCCGGCGC AGGAGGAGGC GCTGATCGAA CTGGTCAGCG GCGCGAACGT CATCCTCGCG ACGCCGACGG GGTCCGGGAA GTCGCTGGTC GCGACGGGCG CGCAGTACGC GGCACTGGCC GGCAACCTGC GCAGCTACTA CACCGCGCCG ATCAAGGCGT TGGTCAGCGA GAAGTTCTTC GCGCTGTGCG GGGTCTTCGG GGCGGAGAAC GTCGGCATGC TCACCGGTGA CGCGGCGGTC AACGCGGCGG CGCCGATCAT CGCCTGCACC GCGGAGGTGC TCGCCAACAT CGCGCTGCGC GAGGGGGCCG ACGCTGACAT CGGGTTGGTC GTGATGGACG AGTTCCACTT CTACGGCGAC CCGGACCGCG GCTGGGCCTG GCAGGTGCCG CTGCTGGAGT TGCCGCACGC CCAGTTCCTG CTGATGTCGG CCACGCTCGG CGACGTCACC TTCCTGCGCG AGGATCTCAC CCGGCGCACC GGCAGACCGA CCGCGCTGGT CGCCCACGCC GAACGTCCGG TCCCGCTGTT CTACTCGTAC GCGACCACCC CGATGCACGA GACCATCGGC GACCTCCTCG AGACCAGACA GGCGCCGATC TACGTCGTCC ACTTCACCCA GGCCTCGGCG CTGGAACGGG CCCAGGCGTT GATGAGCATC AACGTGTGCA CCAAGGCGGA GAAGGCCGCG ATCGCCGACC TGATCGGGGC GTTCCGGTTC TCGACGGCCT TCGGCAGCAC GTTGTCGCGG CTGGTGCGCC ACGGGATCGG TGTGCACCAC GCCGGGATGC TGCCCAAATA CCGGCGCCTG GTCGAACAGC TCGCCCAGGC CGGTCTGCTG AAGGTCATCT GCGGCACCGA CACCCTCGGT GTCGGCATCA ACGTGCCCAT CCGCACCGTG GTCTTCTCGG CGCTGTCGAA ATACGACGGC ACCCGCACCC GGCTGCTCAA CGCCCGTGAG TTCCACCAGA TCGCCGGCCG CGCCGGGCGG GCGGGCTACG ACACCGCCGG CACCGTCGTC GTCCAGGCAC CCGATCACGA GGTCGAGAAC CTCAAACAGT TCGCGAAGGT CGCCGACGAT CCGAAGAAAC GCCGGAAGTT GGTGCGCCGC AAGGTGCCCG AGGGCATGGT GCCGTGGAGC GAGTCGACCA TGACCCGGCT GGTGGAGGCG GTTCCGGAGC CGTTGCACAG CAACATGCGG GTGTCGACGG CGATGATTCT CGATGTCGTT GCGCGGGCGA GCGAAGCGAC GGGGGAAGGA TCCAGGACCG GGGACCCGTT CGTCGCGATG CGCCGGCTGC TCACCGACAA CCACGAACCC CGCAAACGTC AGCTGCAGCT CATCCGCGAG GCGGTGGGGA TCGCCCGCTC GTTGCTGCAG GCCGGGATCA TCGAACGCGT CGACACACCC GACGGCCGGC GCTACCGGTT GACCGTCGAC CTGCCCCGCG ACTTCGCGCT CAACCAGCCG CTGTCGACGT TCGCGCTGGC CGCAATCGAA GTGCTCGACG CATCGGCGGA AACCTATGCC CTGGACGTCG TCTCGGTGAT CGAGGCGACG CTGGAAGATC CGCGCCAGAT CCTGGCCGCC CAGCTGAAGA AGGCCAGGGG CGAGGCCGTC GCCGCGATGA AGGCCGAGGG CATCGAATAC GACGAGCGGA TCGAACTGCT CGACGACGTC ACCTATCCCA AACCGCTCGA AGAACTGCTC GAGCACACCT TCGAGGTGTA TCTGCAGACC AATCCGTGGG CCGCGGACGG GCGGCTGTCG CCGAAGTCCG TGGTGCGCGA GATGTGGGAG CGCGCATTCA CCTTCCGCGA GTACGTGAGT GTCTACGGGC TCACCCGTTC CGAGGGTGCC GTACTGCGCT ACCTGTCCGA CGCGTACAAG GCGCTGCGCT CCGGGGTGCC CGCGGCCGCG CGCACCGACG AGGTCACCGA TATCGTCGAG TGGCTCGGTG AGCTTGTGCG GCAGGTCGAT TCGAGCCTGC TCGACGAGTG GGAGCAGCTG ACCAGCCCCG ACCGGCCGCT GGACGCCCCG GTGGCGGTAC CGGCGCGACC GCGCCCGCTC ACCGGCAACG AGCGGGCGTT CACCGCGATG GTGCGCAACG CGCTGTTCCG CCGGGTGGAG CTGTTCGCCC GGCGCCGCTG GGCCGAACTC GGCGAGTTGG ACGCCGCGTC CGGTTGGACG GCGCAGGACT GGGCGCAGGT CGGTGACGAG TACTTCGCCG AACACGACGA CGTGGGCACC GGCGCCGACG CGCGCGGACC GGCGCTGCTG ATCTTCGACC GCGAGCCCGG GGTGTGGCGG GTGCGCCAGA TCCTCGACGA TCCCGCCGGT GACCACGACT GGGGTTTCGA CGTCGAGGTG GACCTGGAGG CCTCCGACGA GGAGGGGACG GCGGTCGTGC GCCTCGTCGA CGCGGGCCAC CTTGACTGA
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Protein sequence | MTTPLLDDPS DLSTLRAKGE DPDELFASFA AWAEAGGTAL YPAQEEALIE LVSGANVILA TPTGSGKSLV ATGAQYAALA GNLRSYYTAP IKALVSEKFF ALCGVFGAEN VGMLTGDAAV NAAAPIIACT AEVLANIALR EGADADIGLV VMDEFHFYGD PDRGWAWQVP LLELPHAQFL LMSATLGDVT FLREDLTRRT GRPTALVAHA ERPVPLFYSY ATTPMHETIG DLLETRQAPI YVVHFTQASA LERAQALMSI NVCTKAEKAA IADLIGAFRF STAFGSTLSR LVRHGIGVHH AGMLPKYRRL VEQLAQAGLL KVICGTDTLG VGINVPIRTV VFSALSKYDG TRTRLLNARE FHQIAGRAGR AGYDTAGTVV VQAPDHEVEN LKQFAKVADD PKKRRKLVRR KVPEGMVPWS ESTMTRLVEA VPEPLHSNMR VSTAMILDVV ARASEATGEG SRTGDPFVAM RRLLTDNHEP RKRQLQLIRE AVGIARSLLQ AGIIERVDTP DGRRYRLTVD LPRDFALNQP LSTFALAAIE VLDASAETYA LDVVSVIEAT LEDPRQILAA QLKKARGEAV AAMKAEGIEY DERIELLDDV TYPKPLEELL EHTFEVYLQT NPWAADGRLS PKSVVREMWE RAFTFREYVS VYGLTRSEGA VLRYLSDAYK ALRSGVPAAA RTDEVTDIVE WLGELVRQVD SSLLDEWEQL TSPDRPLDAP VAVPARPRPL TGNERAFTAM VRNALFRRVE LFARRRWAEL GELDAASGWT AQDWAQVGDE YFAEHDDVGT GADARGPALL IFDREPGVWR VRQILDDPAG DHDWGFDVEV DLEASDEEGT AVVRLVDAGH LD
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