| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5630 |
|---|
| Symbol | |
|---|
| ID | 4881327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5881977 |
|---|
| End bp | 5883191 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640142948 |
|---|
| Product | cupin 4 family protein |
|---|
| Protein accession | YP_001073884 |
|---|
| Protein GI | 126438193 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.533226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCC GCTGCATCGC CACCGACCCG CACACGTTCG CCACCGAATA CTGGGGTCGC
CGACCGCTGC TCAGCCGTTC CGGTGCGCTG CCCCGCGATT TCGCCGACCT GCTCTCGCCC
GGGATGGTCG ACGAGTTGAT CGCCGAACGC GGGGTACGCG CACCGTTCAT CCGGCTCGCC
AAAGAGGGTG ACGTCCTCGC CAAGGACTGC TATCTCGGGC CCGCCGGCTT CGGCGCCGAG
ATGCCCGACC AGGTGGACTC CGCCAAGGTG CTCACCCAGT TTTCCGCCGG CGCCACCATC
GTCATGCAGG GTCTACACCG GCTCTGGCCC CCGGTCATCG ACCTCGTCCG CCACCTGGTC
GACGACCTCG GCCATCCGGT GCAGGCCAAC GCCTACATCA CGCCCCCTAG CAACCGGGGC
TTCGACCCGC ACTACGACGT CCATGACGTC TTCGTGCTGC AGACGGCCGG CGAGAAGCGC
TGGGTCGTCC ACGAACCCGT CCATCCGCAC CCGCTGCCGT CGCAACCGTG GACGCAGCAC
CGTGACGCTA TCGCCGAACG CGCCGCCGGT GAACCGGTCA TCGACACCGT GCTCGCCCCC
GGCGACGCGC TGTATCTGCC GCGCGGGTGG GTGCATTCGG CGCACGCCCT GGACACGACG
TCGATCCACC TGACCATCGG CGTCTCTGCG GTGACGGGTG TCGACGTGGC CCGCGCCGTC
GTCGACGCGC TGGCGGACAG CGCCGCGTTC CGGGCGCCCC TGCCCATGGG CGGCGATCCC
GCCGACCGGG ATGAGATCAT CGCGGCGGTG ACCAAGGTGA TGGCACAGAT GGTCGAGACC
ATGCGCGACG ATGCGACCGC GCTCAGCGGT GCGGCCGCCG ACCGGTTGAC CCGCACGCAC
GCCTCCCGGA CGCGTCCGGT CGCCGTCCGC CCGCTGGCCA CGCTCGACGC GGCCGCACAC
GCCGACACCA CGACGGTGCA GTGGCGTCAC GGACTCGTCG CGACGGCCGA CACCGCCGGT
GACCGGATCG AGCTGCGGTT GACCGACCGG GTCCTCTCCT TCCCCGCCTC GTGTGCGCCG
GCGGTGCTTG CGCTGCAACG CGGTCTGGCC GCCGATGCGG GCAGCCTGCC CGGACTCGAC
CGGGCCGACG GCACCGTGCT CATTCGCAGA CTGCTGCGCG AGGCGGTCGT GACGCCGGTG
CCGGCCACCG CATGA
|
|---|
| Protein sequence | MLSRCIATDP HTFATEYWGR RPLLSRSGAL PRDFADLLSP GMVDELIAER GVRAPFIRLA
KEGDVLAKDC YLGPAGFGAE MPDQVDSAKV LTQFSAGATI VMQGLHRLWP PVIDLVRHLV
DDLGHPVQAN AYITPPSNRG FDPHYDVHDV FVLQTAGEKR WVVHEPVHPH PLPSQPWTQH
RDAIAERAAG EPVIDTVLAP GDALYLPRGW VHSAHALDTT SIHLTIGVSA VTGVDVARAV
VDALADSAAF RAPLPMGGDP ADRDEIIAAV TKVMAQMVET MRDDATALSG AAADRLTRTH
ASRTRPVAVR PLATLDAAAH ADTTTVQWRH GLVATADTAG DRIELRLTDR VLSFPASCAP
AVLALQRGLA ADAGSLPGLD RADGTVLIRR LLREAVVTPV PATA
|
|---|
| |