| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5624 |
|---|
| Symbol | |
|---|
| ID | 4881321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 5877722 |
|---|
| End bp | 5878999 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640142942 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_001073878 |
|---|
| Protein GI | 126438187 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.598733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.403775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGA AGATCGCGGC GGTCGCCTCG CCGCCGTCGG CCGTGCTGAT CGCGGTTCTG
GCGCTGCTCA ACGCGGTGAC GCCGTTCTCG ATCGACATGT ACCTGTCGGC GTTTCCCGAG
ATGGCGTCCG AATTCGGGGT GTCGCCGTCG ACGATCCAGC TCTCGCTCAC GACGTTCTTG
ATCGGGTTGG CGGTCGGTCA GCTGATCATC GGAACGCTGT CCGACCGTTA CGGCCGGCGG
CGGCCTCTCA TCATCGGCAC CGTGGCCTGC GTCGCGGTCA GCGTGGCGTG CGCAGTGGCC
CCGTCGATTG CGCTGCTGAT CGGCCTGCGG TTCGCGCAGG GGTTCTGCGG TGCGGCGGGT
GTGGTGATCT CCCGGGCCGT GATCGCCGAC CGCTCCCGCG GCTCTCGCGC CGCGCGGCTG
TTCGCGGTGA TGATGCTCAT CGGCGTTCTC GCGCCGATCA CCGCCCCGAT CCTCGGCGGC
GTCATCGTCA CCGGATTCGG CTGGCGCGCC GTCTTCCTCG CGCTGGCGGT ACTGAACCTG
GCGACCCTGC TGGGCGTCGT GCTGACCGTG CGCGAATCCC TGTCCGAAGA GCATCGGCGG
CCGGGCGGTC TCAAGGCGTT GGGGGTCAGT GCCCGGACGG TGCTGGGGAA CCGCCACTAC
CTGGGCCACA CGCTGGTGAT GGCGTTTGCC GCAGCCGCGA TGTTCGGCTA CATCGCGGCG
TCGCCGTTCG TCGTCCAGAA CATTCTGGGG TTCTCACCCG CGGCGTACTC GGTGACGTTC
GGATCGTGTG CGCTCGCCGT CGGCGCGGGC AGCCTGATCT CCGCGCGCCT GGTGCGGACC
GTCGCGCCGC GCCGGGTGCT GATGGGCGGC GTCACGGCAC TGCTGGTGGT CGCGACACTG
ATGTTGCTCA ACGTCACCGC CGGCCACGTG ATCGGTTGGG CCACCATCGC TTTGATGGCG
TGCTTCATGG GCAGTATCGG ATTCGTCTAC GCCAACGCCA CCGCGCTGGC CCTCGGCGAG
GTACCGCGCG CGGCGGGAAC CGGATCGGCC GTTCTGGGTT TCCTCCAGTA CGGCATGGGT
GCGGTCACCC CGCCGCTGGT CGGGTTGGCG GGTCAGTCCA GCGCGGTGCC GATGGGTCTG
GTGATGTTCG GCGCCGCGAC GCTGGCGGCC CTGTCGATGT TCGTGCTGAC CCGCGGGCAT
GTGCCGTTCG GGGATGAGGA CGACGCCGCC GGCGACGCGC CGGTCACTGT GTCAACAGGT
GGCACCACGA GTCGGTGA
|
|---|
| Protein sequence | MSQKIAAVAS PPSAVLIAVL ALLNAVTPFS IDMYLSAFPE MASEFGVSPS TIQLSLTTFL
IGLAVGQLII GTLSDRYGRR RPLIIGTVAC VAVSVACAVA PSIALLIGLR FAQGFCGAAG
VVISRAVIAD RSRGSRAARL FAVMMLIGVL APITAPILGG VIVTGFGWRA VFLALAVLNL
ATLLGVVLTV RESLSEEHRR PGGLKALGVS ARTVLGNRHY LGHTLVMAFA AAAMFGYIAA
SPFVVQNILG FSPAAYSVTF GSCALAVGAG SLISARLVRT VAPRRVLMGG VTALLVVATL
MLLNVTAGHV IGWATIALMA CFMGSIGFVY ANATALALGE VPRAAGTGSA VLGFLQYGMG
AVTPPLVGLA GQSSAVPMGL VMFGAATLAA LSMFVLTRGH VPFGDEDDAA GDAPVTVSTG
GTTSR
|
|---|
| |