Gene Mjls_5623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5623 
Symbol 
ID4881320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand+ 
Start bp5877169 
End bp5877756 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID640142941 
ProductTetR family transcriptional regulator 
Protein accessionYP_001073877 
Protein GI126438186 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.63347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.363092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACGC TTCGCGAGGC CCAGAAACAG CGCACGCGGG GACTGCTGCT CGAATGCGGG 
CTGGAGTCGT TCGCGTCGAA GGGGTACCAG GCCACCACGA TCGACGACAT CGCCGCGGCA 
GCGGGGACCA CCCGCGCGAC CTTCTATCTG CACTTCTCGT CCAAGGCGCA GCTCATGCGT 
CAGTTGATCG ACGACGTCGA CGCGATCCTC ACCGCGGCCG ACGACCCGCC GCTGACGGAG 
GTCGTCGCGT CGGGCAGCCG AGATCTGCTG CGCGAGTGGT TGAGTCGCAA GTTCGACCAG 
TGGCCGGCGA TCCGGCCGTA CATGCTGGTC GTCCACGACG CGGAGTTCAG CGAGCCCGAA 
GTGGCTGCGG TACTGGACAA ATGGTTCGAC GGCACGGTCG AGGCCATGCG GGCCGGCCTG 
GATGCGGCGG GCCGGTTCGA CGCCGAATCC CGCCGCCCCC GATGCCTGCT GGCGTTCGGA 
CAGTTCGAAT TCGTGTCGCG CCAGTGGTTC CGGCGCGGCT GGCAGGTGGA GCGGGAGGTC 
CTGCTCGAGA CGCTCACCGA CTCGTGGTGC CACCTGTTGA CACAGTGA
 
Protein sequence
MATLREAQKQ RTRGLLLECG LESFASKGYQ ATTIDDIAAA AGTTRATFYL HFSSKAQLMR 
QLIDDVDAIL TAADDPPLTE VVASGSRDLL REWLSRKFDQ WPAIRPYMLV VHDAEFSEPE 
VAAVLDKWFD GTVEAMRAGL DAAGRFDAES RRPRCLLAFG QFEFVSRQWF RRGWQVEREV 
LLETLTDSWC HLLTQ