| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5608 |
|---|
| Symbol | |
|---|
| ID | 4881305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5860343 |
|---|
| End bp | 5861302 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640142926 |
|---|
| Product | DNA primase, small subunit |
|---|
| Protein accession | YP_001073862 |
|---|
| Protein GI | 126438171 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
|---|
| TIGRFAM ID | [TIGR02778] DNA polymerase LigD, polymerase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.613871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.440344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG GGGAGAGCCG CGCCGGGGTG GCCCTGACCA ATCTCGACCA ACCGCTGAGC
CCGGATGCCG GGGCGACCAA ACGCGACCTC GTCGACTACC TCGATGCGGT GGCCGACCGG
ATCGTGCCCG GCCTGGCCGG GCGTCCCCTC ACGGTCCTGC GGGTGCTGCG CGGGCAGGCG
CCGTTCATGC AGAAGAACGC GCCGAAGTAC ACCCCGGAGT GGGTGAAGAC CGTCGCGATC
TGGGCGGAGA GCTCACACCG GGAGGTGCGG TATCCGCTGT GCGACGACCG CCGCACCCTG
CTGTGGCTGG CGAATCAGCG TGCGGTCGAG TACCACCCGA CGCTCGGTCT GGCCGAGAAC
ATCTACCGGC CCACCCACCT GGTGCTCGAT CTGGATCCGC CGACGGAGAC CGATTTCGCG
GCGGTCGTCG ACGTCGCGCA GTTGGTCCGG CAGGCGCTCG CCGACAGCGG ACTCGCGGGT
GCGGTCAAGA CGAGCGGGGC CAAGGGTCTG CACGTCTTCG TACCGGTCGA CGACAGCGCA
CCGGTCGAGG ACGTCGCCGC CGCGACGCGG GCGCTGGCGG CGCGTGCGGA AGCCCTCGAC
CCGTCGATCG CCACCACGGC GTTCATCGTC GAGGACCGCC ACAGCAAGGT CTTCGTCGAT
TCGACGCGGG CCGGCGGTGC CACCGTCGCG GCGGCCTACA GCCCGCGGTT GCGGCCGGGC
ACTCCGGTGT CGTTTCCCCT CGACTGGTCG GAGCTGTCCG CGGTCACGCC GGGGGACTTC
ACCGTGCACA CCGCCGTCGA AGCGCTCGAC GGCCGCGATC CGTGGGCCGA GTCGATGCCT
GCCCCGCAGC GGTTGCCCGA CGAGCTCATC GAACACGGCC GCACCATCCC CGTCGCCCGG
GTGGCCGCGA TGCACGAAGG CAAGCGCCGC GCCAAGGCCC GCCGCACCGG CGGTGCGTGA
|
|---|
| Protein sequence | MSAGESRAGV ALTNLDQPLS PDAGATKRDL VDYLDAVADR IVPGLAGRPL TVLRVLRGQA
PFMQKNAPKY TPEWVKTVAI WAESSHREVR YPLCDDRRTL LWLANQRAVE YHPTLGLAEN
IYRPTHLVLD LDPPTETDFA AVVDVAQLVR QALADSGLAG AVKTSGAKGL HVFVPVDDSA
PVEDVAAATR ALAARAEALD PSIATTAFIV EDRHSKVFVD STRAGGATVA AAYSPRLRPG
TPVSFPLDWS ELSAVTPGDF TVHTAVEALD GRDPWAESMP APQRLPDELI EHGRTIPVAR
VAAMHEGKRR AKARRTGGA
|
|---|
| |