Gene Mjls_5562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5562 
Symbol 
ID4881259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5812536 
End bp5813891 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content68% 
IMG OID640142879 
Productamino acid permease-associated region 
Protein accessionYP_001073816 
Protein GI126438125 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCCG AAACGTCATC GGAAGCGACT GAACAGGTGC AGGACGAGCC GGCGACCGGC 
GGCAAGCTCA AACGCAAGAT CACCGGGTCG TTGCTGTTCC TGTTCATCCT CGGTGACGTG
CTCGGCGCGG GCATCTACGC GCTGATGGGG GTGCTGGCGC AGGACGTCGG CGGCGTGCTG
TGGGCGCCGC TGCTGGTTGC GTTGCTGCTG GCGCTGCTCA CGGCGGGCTC GTATGCCGAA
CTGGTCACCA AGTATCCGAA GGCCGGCGGT GCCGCCGTCT TCGCCGAGCG AGCGTTCAAA
CGGCCGGTGG TGTCGTTCCT CGTCGGCTTC AGCATGCTGG CCGCCGGCGT CACCAGCGCC
GCCGGGCTGG CGCTGGCCTT CGCGGGGGAC TACCTGTCGA CGTTCATCGA CGTACCGGCG
ATCCCCGCCG CGATGGTGTT CCTCGGGCTC GTGGCGGCCC TGAACGCGCG CGGCATCAAC
GAATCGGTCA AGAGCAACGT GGTGATGACC GTCATCGAGT TGAGCGGTCT GCTGATCGTG
ATCGTCGCCG TGGCGATGAT GGTCGGCGGC GGACGTGGTG AGGTGGGACG GGTCGTCGAG
TTCCCGGACG GCGCCACGCC GGCGCTGGCG ATCCTGGCCG GAGCGATCGT GGCCTACTAC
TCGTTCGTCG GGTTCGAGAC GTCGGCCAAT GTCGCCGAGG AGATCCGGAA TCCGAGCAAG
GTGTATCCGA CCGCGCTGTT CGGCGCCCTG ATCGCAGCGG GTGTGGTCTA TGCGCTGGTC
GGTGTCGCCA GCGCCGTCGC ACTGCCCGCC GACCAGCTCT CCGAATCGTC GGGCCCGTTG
CTCGACGTGG TCTCGGCGGC CGGTGTCGGC GTGCCGGACT GGTTGTTCAG CGCCATCGCG
CTGGTCGCGG TGGCCAACGG CGCGCTGTTG ACGATGATCA TGTCGAGCCG GCTGACCTAC
GGAATGGCCG AACACGGGCT TCTTCCCTCG GTGCTGAGCC GGGTGCTGCC CCAGCGCCGG
ACCCCGTGGG TGGCGATCGT CGCGACCACC GTGGTGGCCA TGTGCCTGAC CCTGGTCGGT
GAATTGTCGA CGCTGGCCGA GACCGTGGTG CTATTGCTGT TGTTCGTGTT CATCTCGACC
AACGTGGCCG TGCTGGTGCT GCGCCGCGAT CATGTCGGAC ACGACCACTT CCGCGTGTGG
ACCGCGGTAC CGGTGCTCGG CGTGGCGTCT TGTGTGCTGC TGATGACCCA GCAGACCGCC
AAGGTGTGGG CGTTCGCCGC GATCATGCTG GCGGTGGGCG CGGTCCTTTA CGGCCTGGCG
CGGATCGCCA CGAAACGCGA GGGCACCGCG GTCTGA
 
Protein sequence
MSPETSSEAT EQVQDEPATG GKLKRKITGS LLFLFILGDV LGAGIYALMG VLAQDVGGVL 
WAPLLVALLL ALLTAGSYAE LVTKYPKAGG AAVFAERAFK RPVVSFLVGF SMLAAGVTSA
AGLALAFAGD YLSTFIDVPA IPAAMVFLGL VAALNARGIN ESVKSNVVMT VIELSGLLIV
IVAVAMMVGG GRGEVGRVVE FPDGATPALA ILAGAIVAYY SFVGFETSAN VAEEIRNPSK
VYPTALFGAL IAAGVVYALV GVASAVALPA DQLSESSGPL LDVVSAAGVG VPDWLFSAIA
LVAVANGALL TMIMSSRLTY GMAEHGLLPS VLSRVLPQRR TPWVAIVATT VVAMCLTLVG
ELSTLAETVV LLLLFVFIST NVAVLVLRRD HVGHDHFRVW TAVPVLGVAS CVLLMTQQTA
KVWAFAAIML AVGAVLYGLA RIATKREGTA V