Gene Mjls_5506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5506 
Symbol 
ID4881203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5763843 
End bp5764697 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID640142823 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001073760 
Protein GI126438069 
COG category[R] General function prediction only 
COG ID[COG4132] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC TGGGCCGACG GCTGCGCGAC GGGGTGCCGC TGCTGCCGTT CTTCGCCGTC 
CTGACGATCT TCCTGCTGAT CCCGACGGTG ACGGTGGTGG TGAACGCCTT CGTCGCCGAC
GGCGCCTTCT CCCTGGACCG CATCGAGGCG TTGTTCTCCG CGACCGCGCT GTCGGCGTTG
TGGAAGAGCG TGCTGCTCTC CGGCAGCACC GCGCTGATCG GAGCGGTCCT CGGCGCGCTG
TTGTCCTGGC TGATAGTGAG CAGCCCGCCG GAGTCGATGG TGCGCCGCGC GGTGCTCGCG
CTGTGCAGCG TCCTCGCCCA ATTCGGGGGT GTCGCACTGG CATTCGCGTT CCTGGCGACC
GTCGGCCTCA ACGGGGTGCT GACGCTGTGG ATCCAGCAGG CACTGGGCTG GAACCTCGCC
GGATCGGGCT GGCTCTACAG CCTGTCCGGG CTCATCCTGG TGTACACCTA CTTCCAGATA
CCGCTGATGG TCATCGTGTT CGTCCCCGCG CTGGAGGGAC TGCGCGAACA GTGGCGGGAG
GCGGCGGTCA ACCTGGGCGC CTCGACCTGG CAGTACTGGC GCGAGGTCGG CTTCCCGCTG
CTGACGCCGG CGTTCCTCGG ATCGCTTCTG CTGTTGTTCG CCAACGCCTT CGCCGCATAC
GCGACGGCCG CGGCGCTGGT CAGCCAGGGC AGCCCGATCG TGCCGCTGCT GATCCGCTCC
GCGCTGACCA GTGAGGTGGT GCTCGGCCAG TCCGGCTTCG CCTACGCGCT CGCGCTGGAG
ATGATCGTCG TGGTGGCCTT GGTGATGGTC GCCTACAACG CGCTGGTGCG CCGCACCGCG
AGGTGGCTCC AGTGA
 
Protein sequence
MSTLGRRLRD GVPLLPFFAV LTIFLLIPTV TVVVNAFVAD GAFSLDRIEA LFSATALSAL 
WKSVLLSGST ALIGAVLGAL LSWLIVSSPP ESMVRRAVLA LCSVLAQFGG VALAFAFLAT
VGLNGVLTLW IQQALGWNLA GSGWLYSLSG LILVYTYFQI PLMVIVFVPA LEGLREQWRE
AAVNLGASTW QYWREVGFPL LTPAFLGSLL LLFANAFAAY ATAAALVSQG SPIVPLLIRS
ALTSEVVLGQ SGFAYALALE MIVVVALVMV AYNALVRRTA RWLQ