Gene Mjls_5504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5504 
Symbol 
ID4881201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5762033 
End bp5763073 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content70% 
IMG OID640142821 
ProductABC transporter related 
Protein accessionYP_001073758 
Protein GI126438067 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG GAGTCGCCGT CGAACTCAAC GACCTGACCC GGGTCTACGG AACGGTTCAT 
GCGCTCGACG GGCTGACCCT GCACATGCAG CCCGGCGAAC TCGTCGCACT GCTCGGCCCC
TCCGGGTGCG GGAAGACCAC CGCGCTGCGC ATCCTCGCCG GCCTCGACGA GGCCACGTCG
GGTTCGGTGT CGGTCGACGG TCGCGACGTC AGCCGCGTGC CCGCCAACAA ACGCGATATG
GGCATGGTGT TCCAGGCCTA CAGCCTCTTC CCGCACCTGA CCGTGCTCGA CAACGTCGCG
TTCGGCCTCA AGATGCGCGG AAAAGCCAAG GCGGACCGGC TGTCTCGCGC CGCCGACATG
CTCGACCTGG TCGGTCTGTC GGCGCACAAG CACAAGTACG CCAACGAACT GTCCGGCGGT
CAGCAGCAGC GGGTGGCGCT GGCGCGCGCC CTGGCCGTCC AGCCGCGCGT CCTGCTGCTC
GACGAACCGC TCTCCGCGCT GGACGCGAAG GTCCGCGCAC AGTTGCGCGA CGAGATCCGG
CGTGTCCAGC TCGAAGTGGG GACCACGACG CTGTTCGTCA CCCACGACCA GGAGGAGGCG
CTGGCGGTCG CCGACCGGGT CGGCGTGATG AACCAGGGCC GCCTCGAACA GCTCGCCGCC
CCCGCCGAGC TGTACGCGCA CCCCGCGACG CCGTTCGTCG CGCAGTTCGT CGGGCTCAAC
AACGAGGTGC CGGCCACGGT GAGCGCGGGC AGCGCGCGGC TGCTCGGCAC CGAGGTGCCC
GTGCTCGACG GATCCGCCAC CGGCGGCGAC GGGGTGGCGC TGGTGCGGCC CGAATCGGTC
ACCGTCACCA CCGGCGGCGC CCCGAACGCG ACGGTCACAT CGGTGGCGTT CCTCGGGTCG
ATCTCACGGG TGTACTGCAC CCTGTCCGAC GGCACCGTGC TGTCCGCGCA GTTGCCCAGC
TCGCAGGCGA CGAAATTCAC CAGCGGCGAC GCCGTCACCG TGGGCGTCGA ACCCACCGCG
GTGCTCGTCG TATCGCGTTG A
 
Protein sequence
MTAGVAVELN DLTRVYGTVH ALDGLTLHMQ PGELVALLGP SGCGKTTALR ILAGLDEATS 
GSVSVDGRDV SRVPANKRDM GMVFQAYSLF PHLTVLDNVA FGLKMRGKAK ADRLSRAADM
LDLVGLSAHK HKYANELSGG QQQRVALARA LAVQPRVLLL DEPLSALDAK VRAQLRDEIR
RVQLEVGTTT LFVTHDQEEA LAVADRVGVM NQGRLEQLAA PAELYAHPAT PFVAQFVGLN
NEVPATVSAG SARLLGTEVP VLDGSATGGD GVALVRPESV TVTTGGAPNA TVTSVAFLGS
ISRVYCTLSD GTVLSAQLPS SQATKFTSGD AVTVGVEPTA VLVVSR