Gene Mjls_5488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5488 
Symbol 
ID4881185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5745179 
End bp5746357 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content68% 
IMG OID640142805 
Productalcohol dehydrogenase 
Protein accessionYP_001073742 
Protein GI126438051 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAG TGACCTGGCA GGGCCGACGG AAGGTCTCGG TCGACAACGT GCCGGACCCG 
ATCATCAAGG AGCCGACGGA CGCCGTCATC CGGGTCACCA GCACCAACAT CTGCGGTTCC
GACCTGCACC TCTACGAAAC GCTCAGCGCG TTCATGAGTC CCGGCGACAT CATCGGCCAC
GAGGCCATGG GTGTGGTCGA AGAGGTGGGC ACCCAGACCG GTGACCTGAA GGTCGGCGAC
CGCGTGGTGA TCCCGTTCAA CATCTCGTGT GGAACGTGCT GGATGTGCGA CCACGGTCTG
CAGAGCCAGT GCGAGACCAC CCAGAACCGG GACCAGGGCA CGGGTGCGGC CCTGTTCGGT
TTCTCGAAGC TCTACGGCGA GGTGGCCGGC GGACAGGCCG AGTACCTGCG CGTGCCGCAG
GCGCAGTACA CCCACATCAA GATCCCCGAG GACGGGCCCG ACGAGCGCTT CGTCTACCTG
TCCGACGTGT TGCCCACCGC CTGGCAGGGC GTCGAGTACG CCAACGTGCC CGACGGCGGC
ACGCTGGTCG TCGTGGGGCT CGGACCGATC GGCTCGATGG CGTGCCGGAT CGCCGCGCAC
CGCAACAACT GCCGGGTGAT CGGCATCGAC CTCGTCGAGG AGCGCCTCGA CCGGGCCCGC
CCGTACTGCG CCGAGGTGAT CGACCTGCGC ACGCAGGACG CCGACGCGGT GGTCGCCGAA
CTGACGCAGG GACGCGGCGC CGACTCCGTC ATCGACGCGG TGGGAATGGA GGCGCACGGA
TCCCCCGTCG CCGAAGCCGC CCAGACCGCC AGTGGCTTCC TGCCCTCGAG CATCGGCCGG
GTCGTCATGA AGCATGCGGG TGTGGACCGG CTCGCCGCGC TGAACTCCGC GATCGCGCTC
GTGCGCCGCG GCGGAACGGT ATCGCTGTCG GGTGTGTACG GCGGCGCCGC CGATCCGATC
AACATGATGA CGCTGTTCGA CAAGCAGGTG ACGCTGCGGA TGGGCCAGGC CAACGTCAAG
CGTTGGGTGC CCGACATCCT GCCGCTGCTG ACCGCCGACG ATCCGCTGGG CGTCGAGAAC
TTCGCCACCC ACCGGCTGCC GCTCGCCGAG GCGCCGGGCG CGTACGAGAC CTTCCAGAAG
AAGCAGGACG GGATGGTCAA GGTGGTGCTC ACCCCGTAG
 
Protein sequence
MRAVTWQGRR KVSVDNVPDP IIKEPTDAVI RVTSTNICGS DLHLYETLSA FMSPGDIIGH 
EAMGVVEEVG TQTGDLKVGD RVVIPFNISC GTCWMCDHGL QSQCETTQNR DQGTGAALFG
FSKLYGEVAG GQAEYLRVPQ AQYTHIKIPE DGPDERFVYL SDVLPTAWQG VEYANVPDGG
TLVVVGLGPI GSMACRIAAH RNNCRVIGID LVEERLDRAR PYCAEVIDLR TQDADAVVAE
LTQGRGADSV IDAVGMEAHG SPVAEAAQTA SGFLPSSIGR VVMKHAGVDR LAALNSAIAL
VRRGGTVSLS GVYGGAADPI NMMTLFDKQV TLRMGQANVK RWVPDILPLL TADDPLGVEN
FATHRLPLAE APGAYETFQK KQDGMVKVVL TP