| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5454 |
|---|
| Symbol | |
|---|
| ID | 4881151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5716883 |
|---|
| End bp | 5718421 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640142771 |
|---|
| Product | phytoene dehydrogenase-related protein |
|---|
| Protein accession | YP_001073708 |
|---|
| Protein GI | 126438017 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | [TIGR02734] phytoene desaturase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCG TCGGGGGGCG AACAGACCGC GTGGTGGTCG TCGGCGCCGG ATTGTCCGGC
CTGTCGGCCG CACTACAGCT GGCCGGGCGC GGCCGCACTG TCACGGTGCT CGAACGCGAG
ACGTTCCCGG GCGGCCGGAT GGGCCGGCTC GACATCGACG GGTACCGGCT CGATACCGGG
CCGACCGTGT TGACGATGCC CGACATCATC GAGGACGCCT TCGCCGCCGT GGGCGATTCG
ATGGACGGGC GCCTCGAACT CGACCGCGTC GACCCGGCCT ACCACGCGTC GTTCGCCGAC
GGCAGCGGTC TGTACGTGCA CACCGACGCC ACTGCGATGG CCCCCGAGAT CGAACGCTTC
GCCGGCTCCG ACGCCGCCGA CGGCTATCTG CGGCTGCGCA CCTGGCTGAC CCGGCTGTAC
CAGGCCGAGT TCAACGGTTT CATCGCCTCC AACTTCGATT CACCGCTGTC CCTGGTGACA
CCCCAGCTGG CCCGGCTGGC CGCGATGGGC GGTTTCCGGC GGTGGGATCG CGTGGTGCGC
AACTACATTG CCGACGAACG GCTGCGCCGC ATCTTCACCT TCCAGGCGCT CTACGCCGGC
GTGCCACCAC ACAAGGCGCT GGCCGCCTAC GCGGTGATCG CCTACATGGA CACCGTGGCG
GGGGTCTACT TCCCCCGCGG CGGCATGCGC GCCGTACCGG ATGCGATGGC GGCCGCCGCC
TCCGACGCCG GAGTCGAATT CCGTTACGGT TCAGCGGTTT CCGTGCTCGA ACGCAGCGCC
GACGGCCGGG TGACGGCGGT GCGCACAGAC GCGGGTGACC GCATCCCCAC CGACGCCGTC
GTCCTCACCA CGGAGTTGCC GACCACCTAT CGCCTGCTCG GCCGCACACC GCGGCGCCTG
TTGCCGCTGC GGCCTGCGCC GTCGGCGGTG GTGGCACATG TCGGGTGCGC CAAGGTGGAT
CCCAGCGGGG ATGTCGTGGC GCACCACAAC ATCCTGTTCG GCGGCGCCTG GGAGCAGACG
TTCCGCGACA TCATCGACGA GGGACGGGTG ATGAGCGATC CGTCGCTGCT GGTCACCCGG
CCCACCGCCG GCGACCCGAG CCTCGCACCA CCGGGTCGCG ATCTGCTCTA CGTGCTGGCG
CCCGCACCGA ACAAGGCCGT GGGACACGTC GACTGGTCTC AGACGAGCGA CACCTATGTG
GAGGGGATGC TGGCCACGGT GCGCCGGCGG ATGCCCGCGG TCGGCGACGA CCTCGAACTG
CTGCACGTCG TGGACCCCGA CGGGTGGGCC CGCCAGGACA TGGCGGCGGG CACCCCGTTC
GCGTTGGCGC ACACCTTCGG CCAGACCGGC CCGTTCCGGC CCGCGAACAC GATTCGCGGC
GCCGAGAACG TCGTGCTGGC CGGATCGTCC ACGGTCCCCG GCGTCGGGGT GCCGACCGCG
TTGCTGTCCG GCCGGTTGGC CGCAGATCGA ATCACCGGGA CCGTCACCCC GTCCACCCCC
ACGGCGGCCC CGACCAGAAC GAGGAGCGGG CTGTCATGA
|
|---|
| Protein sequence | MRTVGGRTDR VVVVGAGLSG LSAALQLAGR GRTVTVLERE TFPGGRMGRL DIDGYRLDTG
PTVLTMPDII EDAFAAVGDS MDGRLELDRV DPAYHASFAD GSGLYVHTDA TAMAPEIERF
AGSDAADGYL RLRTWLTRLY QAEFNGFIAS NFDSPLSLVT PQLARLAAMG GFRRWDRVVR
NYIADERLRR IFTFQALYAG VPPHKALAAY AVIAYMDTVA GVYFPRGGMR AVPDAMAAAA
SDAGVEFRYG SAVSVLERSA DGRVTAVRTD AGDRIPTDAV VLTTELPTTY RLLGRTPRRL
LPLRPAPSAV VAHVGCAKVD PSGDVVAHHN ILFGGAWEQT FRDIIDEGRV MSDPSLLVTR
PTAGDPSLAP PGRDLLYVLA PAPNKAVGHV DWSQTSDTYV EGMLATVRRR MPAVGDDLEL
LHVVDPDGWA RQDMAAGTPF ALAHTFGQTG PFRPANTIRG AENVVLAGSS TVPGVGVPTA
LLSGRLAADR ITGTVTPSTP TAAPTRTRSG LS
|
|---|
| |