Gene Mjls_5438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5438 
Symbol 
ID4881135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5697808 
End bp5699031 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content73% 
IMG OID640142755 
ProductDNA polymerase IV 
Protein accessionYP_001073692 
Protein GI126438001 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.151264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTGT CGGCTCCGGC TCGTGGTCAT GCGCAGGCCA GCATCCTGCA CGCTGACCTC 
GACTCCTTCT ACGCCTCGGT CGAGCAGCGC GACGATCCCG CACTGCGCGG CCGGCCCGTC
ATCGTCGGCG GCGGGGTGGT GCTCGCGGCC AGCTACGAGG CCAAGGCCTA CGGCGTCCGC
ACCGCGATGG GCGGCCACCA GGCGCGGCGG CTGTGCCCGC AGGCGGTCGT CGTCCCGCCG
CGCATGGCCG CCTACTCCCA GGCCAGCGCC GACGTGTTCG AGGTCTTCCG CGACACCACC
CCGCTCGTCG AACCTCTCTC GGTGGACGAG GCGTTCCTCG ACATCTCCGG CCTCGGCCGG
GTCTCGGGCA CACCGGTGGC GATCGGCGCG CGCCTGCGGG CCAGGGTGCG CGAGGAGGTC
GGGCTGCCGA TCACCGTCGG GATCGCGCGG ACGAAGTTCC TCGCCAAGGT CGCCAGCCAG
GAGGGCAAAC CGGACGGGCT GCTGCTGGTC CCGCCGGACC GCGAGCTGGC CTTCCTGCAT
CCGCTGCCGG TGCGGCGGCT CTGGGGGGTC GGCGAGAAGA CCGCCGCGAA GCTGCGCGCG
CACGGCATCG AAACCGTCGC CGACGTCGCC GAACTCGGCG AGTCGACGCT GAGCGCGATG
GTCGGTGGCG CGATGGGCCG TCAGCTCTAC GCGCTGTCGC ACAACATCGA TCGGCGCCGG
GTGGTCACCG GCGTCCGGCG CCGCTCGGTT GGGGCGCAGC GGGCGCTGGG CCGCCGCGGC
AACGCCATGA CGGCCGCCGA GGTGGACGCC GTGGTGGTCA ACCTGATCGA CCGCATCACC
CGCCGGATGC GCAACGCCGG TCGCACCGGC CGCACGGTCG TGCTGCGGTT GCGCTTCGAC
GACTTCAGCC GCGTCACCCG CTCACACACC ATGCCGCGCG CGACGGCGTC GACTGACGCC
GTGCTGGCCG CCGCACGCGA TCTGGTCGCG GCGGCGGCCC CGGTGATCGC CGAGCGCGGG
CTCACGCTGA TCGGTTTCGC GGTGTCCAAC ATCGACTGCG ACGGCGCCCA GCAGCTCGAG
TTGCCCTTCG GGCAGGCGCC CGATGCGGGC GCGCTCGACG CCGCGGTCGA CGAGGTGCGC
ACCCGCTACG GCAACGCCGC CGTCACCCGC GGGGTGCTGC TCGGGCGCGA TCCCGGATTG
GAGATGCCGA TGCTGCCGGA CTGA
 
Protein sequence
MFVSAPARGH AQASILHADL DSFYASVEQR DDPALRGRPV IVGGGVVLAA SYEAKAYGVR 
TAMGGHQARR LCPQAVVVPP RMAAYSQASA DVFEVFRDTT PLVEPLSVDE AFLDISGLGR
VSGTPVAIGA RLRARVREEV GLPITVGIAR TKFLAKVASQ EGKPDGLLLV PPDRELAFLH
PLPVRRLWGV GEKTAAKLRA HGIETVADVA ELGESTLSAM VGGAMGRQLY ALSHNIDRRR
VVTGVRRRSV GAQRALGRRG NAMTAAEVDA VVVNLIDRIT RRMRNAGRTG RTVVLRLRFD
DFSRVTRSHT MPRATASTDA VLAAARDLVA AAAPVIAERG LTLIGFAVSN IDCDGAQQLE
LPFGQAPDAG ALDAAVDEVR TRYGNAAVTR GVLLGRDPGL EMPMLPD