Gene Mjls_5410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5410 
Symbol 
ID4881107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5673841 
End bp5675094 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID640142727 
Productseryl-tRNA synthetase 
Protein accessionYP_001073664 
Protein GI126437973 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.192116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.729439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACC TCAAATTCCT GCGCGAGAAC CCCGACGCCG TACGCGCCTC ACAACGATCG 
CGCGGGGAGG ATCCCGCACT CGTCGACGCC CTGCTCGACG CCGACGCGGC CCGGCGCGCC
GCGGTGTCGG CCGCCGACAA CCTGCGCGCC GAACAGAAGG CGGCCAGCAA GAAGGTCGGC
AAGGCCTCGC CGGAGGAACG GCCCGCGCTG CTCACCCGGG CCAAGGAACT CGCCGAACAG
GTCAAGGCCG CCGAAGCCGC GCAGGCCGAC GCCGACCGCA CGTTCACCGC CGCGCACATG
GCGATCTCGA ACGTGGTCAT CGAGGGGGTG CCCGCGGGCG GCGAGGACTG CTTCGCCGTG
CTCGACGTCG TCGGTGAGCC GCGGGCAATC GACGACCCGA AGGACCACCT CGAACTCGGC
GAAGCGCTCG GGCTGATCGA CATGGAGCGC GGCGCGAAGG TGGCCGGATC GCGGTTCTAC
TTCCTCACCG GACGCGGCGC GCTGCTGCAA CTGGGCCTCA TGCAACTGGC GGTGCGCTTG
GCCACCGACA ACGGGTTCAC CCTCGTCATC CCGCCGGTGC TGGTGCGCCC GGAGGTGATG
GCGGGCACCG GGTTCCTCGG GGCGCACGCC GACGAGGTGT ACCGGCTGGA ATCCGACGAC
ATGTACCTGG TCGGCACCTC GGAGGTCCCG CTGGCCGGCT ACCACGCCGA CGAGATCATC
GACCTGTCCG CGGGCCCGCG CCGCTACGCC GGGTGGTCGT CGTGCTTCCG CCGGGAGGCA
GGCAGTTACG GCAAGGACAC CCGCGGCATC ATCCGCGTGC ACCAGTTCGA CAAGGTCGAG
GGCTTCATCT ACTGCAAACC CGAAGATGCT GCCGCCGAAC ATGATCGTCT GCTCGGCTGG
CAGCGCGAGA TGCTCGCCCT CATCGAGGTG CCGTACCGCG TGATCGACGT GGCCGCAGGG
GATCTCGGAT CGTCGGCCGC CCGCAAGTAC GACTGTGAGG CGTGGGTGCC GACACAGCAG
ACCTACCGCG AGCTGACCTC CACCTCGAAC TGCACGACGT TCCAGGCCAG GCGGCTGTCG
ACCCGCTACC GCGACGAGAA CGGCAAACCG CAGATCGCCG CCACCCTGAA CGGGACGCTG
GCCACCACCC GCTGGCTCGT CGCGATCCTG GAGAACCACC AGCAGCCCGA CGGCAGCGTG
CGGGTACCCG CGGCCCTGGT GCCGTTCGTC GGGACGGAGG TGCTCGAACC GTGA
 
Protein sequence
MIDLKFLREN PDAVRASQRS RGEDPALVDA LLDADAARRA AVSAADNLRA EQKAASKKVG 
KASPEERPAL LTRAKELAEQ VKAAEAAQAD ADRTFTAAHM AISNVVIEGV PAGGEDCFAV
LDVVGEPRAI DDPKDHLELG EALGLIDMER GAKVAGSRFY FLTGRGALLQ LGLMQLAVRL
ATDNGFTLVI PPVLVRPEVM AGTGFLGAHA DEVYRLESDD MYLVGTSEVP LAGYHADEII
DLSAGPRRYA GWSSCFRREA GSYGKDTRGI IRVHQFDKVE GFIYCKPEDA AAEHDRLLGW
QREMLALIEV PYRVIDVAAG DLGSSAARKY DCEAWVPTQQ TYRELTSTSN CTTFQARRLS
TRYRDENGKP QIAATLNGTL ATTRWLVAIL ENHQQPDGSV RVPAALVPFV GTEVLEP