Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5343 |
Symbol | |
ID | 4881040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 5595701 |
End bp | 5596699 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640142657 |
Product | prephenate dehydrogenase |
Protein accession | YP_001073597 |
Protein GI | 126437906 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.359036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTCCG GCCCCGGTGC CGTGTGCCAA CCTGGAACGG TGACGAAACC ACCCGTGTGC GTTTTGGGCC TGGGCCTCAT CGGCGGCTCG GTGATGCGCG CCGCCGCGGC CGCCGGGCGC GAGGTGTTCG GGTACAACCG GTCGGTCGAG GGCGTCCAGG GTGCGCGCTT CGACGGTTTC GACGCCAGCG AGCACCTCGA CGAGGTGCTC GGCCGCGCCG CCGAGACCTC GGCGCTGGTC GTGCTGGCCG TGCCGGTGCC CGCCCTCGGA CTCATGCTGG GCCACATCCG CGACGCGGCG CCGCAATGTC CGCTCACCGA TGTGACGAGC GTCAAAGGCG CTGTGCTGGA ACATGTTCGT TCATTCGGCC TACAGGAGCG CTTCGTCGGC GGACACCCGA TGGCGGGCAC CGCGCACTCG GGCTGGGCGG CCGGCGACGC GGCGCTGTTC GTCGGTGCGC CGTGGGTGAT CAGCGTCGAC GACCACGTCG ACCCCGACGT GTGGGCACAC GTGATGACGC TCGCGCTGGA CTGCCACGCG GTGGTGGTGC CGGCCCGCTC CGACGAACAC GACGCCGCCG CGGCCGGCAT CTCGCACCTG CCGCACCTGC TCGCCGAGGC GCTGGCCGTC ACCGCGGGTG AGGTGCCGCT GGCGTTCGCG CTGGCGGCCG GATCGTTCCG GGACGGCACC CGGGTGGCCG GGACGGCGCC CGATCTGGTG CGGGCGATGT GCGAGGCGAA CTCGTCACAA CTCGTCCCGG CGCTGGACCG CAGCATCGAG CTGCTCACCG CCGCGCGGGA GGCGCTGGCG CGACATGGTT CGGTGGCCGA CCTGGTCGAA TCGGGCCACG CCGCCCGCAT GCGCTACGAC AGCTTCAGCC GCCCCGAGAT CATCACCACC GTGATCGGCG AGGAGAACTG GCGCGACGAA CTGGCCGCCG CCGGCCGGGC CGGCGGGGTG ATCAGATCCG CGCTGCCAAC CCGGGATAGT CGACGATGA
|
Protein sequence | MASGPGAVCQ PGTVTKPPVC VLGLGLIGGS VMRAAAAAGR EVFGYNRSVE GVQGARFDGF DASEHLDEVL GRAAETSALV VLAVPVPALG LMLGHIRDAA PQCPLTDVTS VKGAVLEHVR SFGLQERFVG GHPMAGTAHS GWAAGDAALF VGAPWVISVD DHVDPDVWAH VMTLALDCHA VVVPARSDEH DAAAAGISHL PHLLAEALAV TAGEVPLAFA LAAGSFRDGT RVAGTAPDLV RAMCEANSSQ LVPALDRSIE LLTAAREALA RHGSVADLVE SGHAARMRYD SFSRPEIITT VIGEENWRDE LAAAGRAGGV IRSALPTRDS RR
|
| |