Gene Mjls_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5300 
Symbol 
ID4880997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand+ 
Start bp5553119 
End bp5553745 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content64% 
IMG OID640142613 
ProductTetR family transcriptional regulator 
Protein accessionYP_001073554 
Protein GI126437863 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.104655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCT CGTCGCGGCG CGTCGGCGCT GAAACGTCCA AGACCCGGGA CACCCTCCTC 
GACTGTGTCG AGACGATGAT GCTCGAAGAG GGCTACGCGA GCGTCACCTA TCGGGCGTTG 
GCCGCGAAGG CCGGTGTGAC GCCGAGCTTG GTGCAGTACT ACTTCCCCAC CCTCGACGAC 
GTGTTCATCG CCGCGATCCG GCGGTATTCG GAACGCAACC TGGCGTATCT GAACGAGGTC 
ATGGAGAAGC GTGCCGACGA TCCGCTGCGC GCCCTGTGGG AGTACAGCTG GGATGAGGCC 
ACCGGAACGC TGATGACGGA ATTCATGGCG TTGGGCAACC ACCGCAAGTC GATTCGCACC 
GAGATCGCAG CAGTGACCGA GAGCGTGCGC AGGCTTCAGC TGGACGCCCT CGTCGCGAAG 
TTCGGTGAAG ACGCCCGGCC ATGGGGTGAT CTGTCCCTGC CGGCCCTGCA ACTGTTGATC 
TCCAGCCTGC CGAAATTCCT CAACCTGGAG AAGGGCGTCG GGGTCGAGAC CGCGCATGCC 
GAGCTGACCG AGGCATTCGA GCGCTACCTG GATTCGATCG AACCCGCCCC CAAGCGGAAA 
CCGGCCACCC GCAAGAGGTC TCGCTGA
 
Protein sequence
MATSSRRVGA ETSKTRDTLL DCVETMMLEE GYASVTYRAL AAKAGVTPSL VQYYFPTLDD 
VFIAAIRRYS ERNLAYLNEV MEKRADDPLR ALWEYSWDEA TGTLMTEFMA LGNHRKSIRT 
EIAAVTESVR RLQLDALVAK FGEDARPWGD LSLPALQLLI SSLPKFLNLE KGVGVETAHA 
ELTEAFERYL DSIEPAPKRK PATRKRSR