Gene Mjls_5291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5291 
Symbol 
ID4880988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5544960 
End bp5545631 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content63% 
IMG OID640142604 
Producthypothetical protein 
Protein accessionYP_001073545 
Protein GI126437854 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.150619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGA GACACCGCAG AGTGACGTCA GTCACAGAGG TCCCGGCCTT ATCGCTACAC 
AATCGGCTAC CAGCGTCGCG AACTTCGCGC CGGGAAACGT CGAGTTCAAA CGCAACACGA
ACCCAACCGC ACACGGTCAC TGCGGAGACA AGCCACTTGT TCGCCACCGA CGCGGTAAAC
AACGGCCTGC CGCTGCACAT CGCCGCAGCG TTGCTCGGCC ACCTCAACCT CGACACCACC
CGCGGCTACA CGGCGGTGTT CCCTGAGCAC ATCGTCACAG CCCACCAGGC GTTCATCGAA
CGTCGTCGCC AACTGCGGCC TTTCGAGGAG GCGACAGTCG CCGACGACGA CGAGTGGGCC
GATTTTGAAG AACACTTTCT GTTACGCCGC GTCGCCCTCG GCGAGTGTCA CCGCCCTTAT
GGCACGCCCT GCGTTCATGA GCACGCGTGC ACGCGATGCC GGTTCCTGCG CGTCGACCCC
GCCCAGCTGG GCCGCATCAA CGAGATGACT GAAAACGCCG AACAGCGCCT CGTCGAGGCG
AAGGATCGGG CATGGCTCGG CGAGGTCGCC GCCCTCGAAG AGAGCATTAA ACATCTGCGC
GTCCGACAAT CCGAAGCGCA GCAACGACTT TCACACGGCG GTAACCCGTT CGCCGAGCAG
AGACCACAAT GA
 
Protein sequence
MLTRHRRVTS VTEVPALSLH NRLPASRTSR RETSSSNATR TQPHTVTAET SHLFATDAVN 
NGLPLHIAAA LLGHLNLDTT RGYTAVFPEH IVTAHQAFIE RRRQLRPFEE ATVADDDEWA
DFEEHFLLRR VALGECHRPY GTPCVHEHAC TRCRFLRVDP AQLGRINEMT ENAEQRLVEA
KDRAWLGEVA ALEESIKHLR VRQSEAQQRL SHGGNPFAEQ RPQ