Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5291 |
Symbol | |
ID | 4880988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 5544960 |
End bp | 5545631 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640142604 |
Product | hypothetical protein |
Protein accession | YP_001073545 |
Protein GI | 126437854 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.150619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGA GACACCGCAG AGTGACGTCA GTCACAGAGG TCCCGGCCTT ATCGCTACAC AATCGGCTAC CAGCGTCGCG AACTTCGCGC CGGGAAACGT CGAGTTCAAA CGCAACACGA ACCCAACCGC ACACGGTCAC TGCGGAGACA AGCCACTTGT TCGCCACCGA CGCGGTAAAC AACGGCCTGC CGCTGCACAT CGCCGCAGCG TTGCTCGGCC ACCTCAACCT CGACACCACC CGCGGCTACA CGGCGGTGTT CCCTGAGCAC ATCGTCACAG CCCACCAGGC GTTCATCGAA CGTCGTCGCC AACTGCGGCC TTTCGAGGAG GCGACAGTCG CCGACGACGA CGAGTGGGCC GATTTTGAAG AACACTTTCT GTTACGCCGC GTCGCCCTCG GCGAGTGTCA CCGCCCTTAT GGCACGCCCT GCGTTCATGA GCACGCGTGC ACGCGATGCC GGTTCCTGCG CGTCGACCCC GCCCAGCTGG GCCGCATCAA CGAGATGACT GAAAACGCCG AACAGCGCCT CGTCGAGGCG AAGGATCGGG CATGGCTCGG CGAGGTCGCC GCCCTCGAAG AGAGCATTAA ACATCTGCGC GTCCGACAAT CCGAAGCGCA GCAACGACTT TCACACGGCG GTAACCCGTT CGCCGAGCAG AGACCACAAT GA
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Protein sequence | MLTRHRRVTS VTEVPALSLH NRLPASRTSR RETSSSNATR TQPHTVTAET SHLFATDAVN NGLPLHIAAA LLGHLNLDTT RGYTAVFPEH IVTAHQAFIE RRRQLRPFEE ATVADDDEWA DFEEHFLLRR VALGECHRPY GTPCVHEHAC TRCRFLRVDP AQLGRINEMT ENAEQRLVEA KDRAWLGEVA ALEESIKHLR VRQSEAQQRL SHGGNPFAEQ RPQ
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