| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5277 |
|---|
| Symbol | |
|---|
| ID | 4880974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 5526622 |
|---|
| End bp | 5528478 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640142588 |
|---|
| Product | DNA polymerase III subunits gamma and tau |
|---|
| Protein accession | YP_001073531 |
|---|
| Protein GI | 126437840 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.028048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCTCT ACCGCAAGTA CCGACCGGCG ACCTTCGCGG AGGTGGTCGG CCAGGAGCAT
GTCACCGAGC CGCTGTCGAC CGCGCTGTCG GCGGGCCGCA TCAACCACGC CTACCTGTTC
TCCGGCCCAC GTGGCTGTGG GAAGACGTCG TCGGCACGCA TCCTGGCCCG CTCGCTCAAC
TGCGAGCAGG GGCCGACCCC GACGCCCTGC GGAACGTGCG ACTCGTGTGT GGCGCTGGCC
CCCAACGGCC CCGGCAACAT GGACGTCACC GAACTCGACG CGGCCAGCCA CGGCGGTGTC
GACGACACTC GGGAACTGCG GGACAGGGCG TTCTACGCGC CCGCGCAGTC CCGCTACCGC
ATCTTCATCG TCGACGAAGC CCACATGGTC ACCACCGCGG GCTTCAACGC GCTGCTCAAG
ATCGTCGAGG AGCCGCCGGA GCATCTGATC TTCGTGTTCG CCACCACCGA ACCGGAGAAG
GTGCTGCCGA CGATCCGGTC GCGCACCCAC CACTACCCGT TCCGGCTGTT GGCGCCCAAG
ACGATGCGCA CGCTGCTGGA ACGGATCTGC GCCGACGAGG GCGTCACCGT CGACGACGCG
GTGTACCCGC TGGTGATCCG CGCCGGCGGC GGTTCGCCCC GCGACACCCT GTCGGTGCTC
GACCAGTTGC TGGCCGGCGC GGCGGGCGAC CGGGTCGAAT ACGGCCGCGC ACTGGCGCTG
CTGGGGGCCA CCGACGTCGC GCTGATCGAC GACGCGCTCG ACGCGCTGGC CGCCGGGGAT
GCCGCCGCGC TGTTCGGTGC CGTCGAATCG GTGATCGACG CCGGACACGA TCCGCGGCGG
TTCGCGGTCG ACCTGCTCGA GAGGTTCCGC GATCTCATCG TCCTGCAGGC GGTGCCGGAC
GCCGCCGCGC GCGGTGTGGT CGACGCACCC GGTGACGTGC TGGAGCGGAT GCGGGATCAG
GCCGCCCGGC TGGGGTCCGC GACACTGACC CGCTATGCCG AGGTCGTCCA CGCCGGGCTG
GGGGAGATGC GCGGGGCCAC CGCACCGCGA CTGCTGCTCG AGGTGGTGTG TGCCCGGCTG
TTGCTGCCGT CGGCCAGCGA CACGGAATCG GCTCTGCTGC AACGCGTCGA GCGCATCGAG
ACCCGCCTCG AGATGTCGAT ACCCGCGTCC GACATGCCGG CGACCGCTCG CCCCGTCGAA
CCGGCGAAGA CGTTCACCCG CAGGAGTCAG GTGGCCGATG CGCCGGCCCC GGCCCCGGCC
CCCGCTCCGG TCGAGGCCCG TCCGGAACCG CCGGCGCCAC CCGTGCCGCC ACCGCCTGCG
CCCGCGCCGC CGCCCTCTCC GCCCCCGGTG CGCCCACCCG CCGAACCGGT GGTCGAAGCG
CCTGCGGCGG CACCGCCGCC GGCCGCCGGT GCGCCCAATG CAGCTGCGGT GCGCAGCATG
TGGACGACCG TGCGGGAGAA GGTCCGTCAG CGCAGCCGCA CGATCGATGT GATGCTGGCC
GGTGCGATCG TCCGCACGGT CGAGGGTGAC ACACTGGTGT TGAGCCACGA ATCGGCACCG
CTGGCGAAAC GGCTTGTCGA GCAACGGAAC TCCGACTTGA TCCGCGAAGC GCTCAAGGAT
GCGCTCGGTG TGGACTGGAA GATCCGATGC GAGGCGGGCG GTGCTCCCGC GCCGGCTGTG
GTCGCCGAGC CGGCACGTCC CGCCCCCGTC GCCGATCCGC CGCCCCCGGA GGATGACGAG
GAGAGCATGC TGGCCGAAGC GGTGCGCGAG GAGGCCGGGC CCCGTCGTGA CCCCGAGGAA
GCCGCGCTCG AACTACTGCA GAACGAACTG GGCGCTCGCC GGATCGACGG GAGCTAG
|
|---|
| Protein sequence | MALYRKYRPA TFAEVVGQEH VTEPLSTALS AGRINHAYLF SGPRGCGKTS SARILARSLN
CEQGPTPTPC GTCDSCVALA PNGPGNMDVT ELDAASHGGV DDTRELRDRA FYAPAQSRYR
IFIVDEAHMV TTAGFNALLK IVEEPPEHLI FVFATTEPEK VLPTIRSRTH HYPFRLLAPK
TMRTLLERIC ADEGVTVDDA VYPLVIRAGG GSPRDTLSVL DQLLAGAAGD RVEYGRALAL
LGATDVALID DALDALAAGD AAALFGAVES VIDAGHDPRR FAVDLLERFR DLIVLQAVPD
AAARGVVDAP GDVLERMRDQ AARLGSATLT RYAEVVHAGL GEMRGATAPR LLLEVVCARL
LLPSASDTES ALLQRVERIE TRLEMSIPAS DMPATARPVE PAKTFTRRSQ VADAPAPAPA
PAPVEARPEP PAPPVPPPPA PAPPPSPPPV RPPAEPVVEA PAAAPPPAAG APNAAAVRSM
WTTVREKVRQ RSRTIDVMLA GAIVRTVEGD TLVLSHESAP LAKRLVEQRN SDLIREALKD
ALGVDWKIRC EAGGAPAPAV VAEPARPAPV ADPPPPEDDE ESMLAEAVRE EAGPRRDPEE
AALELLQNEL GARRIDGS
|
|---|
| |