Gene Mjls_5268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5268 
Symbol 
ID4880965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5518587 
End bp5519579 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID640142579 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_001073522 
Protein GI126437831 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.674728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGCC ACGGTTGGGG AAGACCGGCG GTCGACACCG GTACAGGCTG GGCCGTCGTC 
GATGTCGAGA CGTCGGGTTT TCGGCCCGGG CAGGCGCGCA TCGTCAGCCT GGCCGCACTC
GCGGTGGGTG ACGACGGCAA CGTCGAGCAG AGCCTGGCCA CCCTGCTGAA TCCGGGTGTC
GACCCGGGGC CCACGCATGT GCACGGGCTG ACCGCCGAAA TGCTCGAGGG TGCGCCGCGC
TTCGGTGACA TCGTCGCCGA CCTCGCCGAA CTGCTGCGCG GTCGCACGCT CGTCGCGCAC
AACGTCGGAT TCGACTACTC GTTCCTGACC GCCGAGGCCG AACTCGTCGG TGCCGAACTG
CCGATCGACT CGGTGATGTG CACCGTCGAA CTCGCCCGCC GCCTCGACCT GGGGACGGAG
AATCTGCGGT TGGAGACCCT CGCGGCGCAC TGGGGTGTGC CGCAACTCAA ACCGCACGAC
GCGCTCGACG ACGCTCAGGT CCTCGCGCAG ATCCTCAAAC CGACGCTGGC GCGCGCCCGC
GAGCGCAGGG CCTGGCTGCC GACGCGTTCG GTGAGCCGGC GGCGGTGGCC CAACGGCCGG
GTCACCCACG ACGACCTGCA CCCGTTGAGG ATGGTGGCCG CACGGCTGCC CTGCGCATAC
CTGAATCCCG GCCGCTTCAT CGCGGGCCGC CCGCTGGTGA AGGGTATGCG CGTCGCGGTC
GCCGCGGAGG TCACGCGCAC CTACGAGGAG CTGATCGAGC GGTTGCTCAC CGCCGGGCTG
GCCTACACCG ACGCGGTGGA CACGGAGACC TCGCTGGTCA TCTGCAACCA GCCCGACGTC
GAACAGGGCA AGGGCTACCA GGCTCAGGAG CTCGGCGTCC CGGTGCTCTC GGACGCCGAC
TTCCTGCGCG CCCTCGACCA CGTCGTCGGG GGCACCGGTA TCGAGGAGTT CTTCGACGCC
ACCACGGTCG GCGATCAGTT CGCGCTGTTC TAG
 
Protein sequence
MVSHGWGRPA VDTGTGWAVV DVETSGFRPG QARIVSLAAL AVGDDGNVEQ SLATLLNPGV 
DPGPTHVHGL TAEMLEGAPR FGDIVADLAE LLRGRTLVAH NVGFDYSFLT AEAELVGAEL
PIDSVMCTVE LARRLDLGTE NLRLETLAAH WGVPQLKPHD ALDDAQVLAQ ILKPTLARAR
ERRAWLPTRS VSRRRWPNGR VTHDDLHPLR MVAARLPCAY LNPGRFIAGR PLVKGMRVAV
AAEVTRTYEE LIERLLTAGL AYTDAVDTET SLVICNQPDV EQGKGYQAQE LGVPVLSDAD
FLRALDHVVG GTGIEEFFDA TTVGDQFALF