| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5229 |
|---|
| Symbol | |
|---|
| ID | 4880927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5475418 |
|---|
| End bp | 5476767 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640142541 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001073484 |
|---|
| Protein GI | 126437793 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.421211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.269494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCTCA CCGGACGTGC GGCGCTGATC GCACTGCTGT GCGTGCTCCC GATCGCCGTG
GCGCCCGCCC CGGGAGTGGC GTTCGTGGCG CTGTTCGGGG CGCTCGTCCT CGCGATCGTG
GCGGACATCG CGCTCGCCGC GAGTCCCCGC CGGTTGCAGG TGACCCGCTC CGGGGACACC
GCGGCCCGGC TCGGCCAGTC CGTCGATTCG GTGCTCGATG TGCACAACCC GGTCCGACGC
CGGATCCGCG GCTCACTGCG CGACGCCTGG CCGCCGAGCG CGCACGGTGC GCCGCGCACG
CACGAGCTCG ATGTTCCTGC GGGACAACGG GTGACGCTGC GCACCTCGCT GCGCCCGACC
CGCCGTGGTG ACCTGCGGTC CGCGCTCGTC ACGGCCCGCT CGATCGGTCC GCTCGGCCTG
GCCGGCAGGC AGGCGTCCCA CCGGGTGTCG GGTCAGATCC GGGTGCTGCC ACCGTTCCTG
TCGCGCAAGC ACTTACCGTC ACGGTTGGCG CGGTTGCGGG AACTCGACGG CTCGACACCC
GCGCTGATCC GCGGCCAGGG CACCGAATTC GACTCGCTGC GCGAGTACGT CGTCGGCGAC
GACGTCCGCT CGATCGACTG GCGGGCGACG GCCCGGCGGG CCGACGTCGT CGTTCGCACG
TGGCGGCCGG AACGCGATCA GCGCATCGTC ATCGTCCTGG ACACCGGCCG CACGTCGGCC
GGGCGCGTCG GGGTCGACCC GACGGCAACC CGATCGCCGG CTCCGCCGGC GGCCCAACAC
CCGGGCGGCT GGCCGCGCCT GGACTGGTCC ATGGACGCCG CGCTGCTGCT GGCGGCGCTC
GCCGCGCGCG CCGGCGACCA CGTCGACTTC CTCGCCCACG ACCGGGTCAC CCGCGCCGGG
GTGTTCAACG CCTCGCGCAG CGAGCTACTC GCCCAGTTGG TGTCGGCGAT GGCGCCGCTG
CAGCCCGCGC TGGTCGAATC CGACCCCGCC GCGATGGCAT CGGCGATCCA GCGCCGCGTG
CGCCGTCGCG CGCTGGTGGT GCTGCTCACC GACCTCAACG CCTCGGCGCT CGAAGAAGGC
CTGATAACGG TGCTGCCGCG ACTCGCCGCC CGCCACCACG TGCTGATCGC GGCGGTTACC
GACCCCCGCG TTGACCTGCT CGCCGCGGGC CGCGACGACG CCGCCGCCGT GTACGACGCG
GCCGCCGCGG AACGGTCGCG CAATGACCGC AACCGCATCG CGGGCACGCT GCGCCAGGCG
GGTGTGGACG TGGTGGACGC GCCACCCGAG GAACTCGCAC CGGCACTCGC CGACCGCTAC
CTGCACATGA AGGCCACCGG CCGCCTCTGA
|
|---|
| Protein sequence | MVLTGRAALI ALLCVLPIAV APAPGVAFVA LFGALVLAIV ADIALAASPR RLQVTRSGDT
AARLGQSVDS VLDVHNPVRR RIRGSLRDAW PPSAHGAPRT HELDVPAGQR VTLRTSLRPT
RRGDLRSALV TARSIGPLGL AGRQASHRVS GQIRVLPPFL SRKHLPSRLA RLRELDGSTP
ALIRGQGTEF DSLREYVVGD DVRSIDWRAT ARRADVVVRT WRPERDQRIV IVLDTGRTSA
GRVGVDPTAT RSPAPPAAQH PGGWPRLDWS MDAALLLAAL AARAGDHVDF LAHDRVTRAG
VFNASRSELL AQLVSAMAPL QPALVESDPA AMASAIQRRV RRRALVVLLT DLNASALEEG
LITVLPRLAA RHHVLIAAVT DPRVDLLAAG RDDAAAVYDA AAAERSRNDR NRIAGTLRQA
GVDVVDAPPE ELAPALADRY LHMKATGRL
|
|---|
| |