| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5220 |
|---|
| Symbol | |
|---|
| ID | 4880918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 5468105 |
|---|
| End bp | 5468800 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640142532 |
|---|
| Product | putative methylase |
|---|
| Protein accession | YP_001073475 |
|---|
| Protein GI | 126437784 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00537] HemK-related putative methylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00893097 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGACTG CATACACCGA CGAGCGCGAC ACCGTGGTCG CCGCGGACGG CGTGTACGCC
CCGCAGGAAG ATTCGCAACT GCTGATCGAC ATCATGGAGA AGACCGGTCT CGCCGTCGGT
CGCCGTGCCG TCGACCTGTG CACGGGCAGT GGAGTGGTGG CGGTCAACGC CGCCCTGCAG
GGTGCCTCGT CGGTCACCGC CTTCGACATC TGCCCGCGCG CTGTGCGATG CGCACGCGGC
AATGCGCTCG GAGCCGGGGT CGATGTGGAC GTCCACCTCG GATCTTGGGC GCGGGCAGTG
GAATTCGACC CGTTCGACCT GGTGACGTGC AACCCGCCGT ACGTCCCGCA CGCCCCCGAA
GCCGACCGGG AGCCGGTGCC GTCGAGCGTC GGCCCGGCCC GCGCGTGGGA TGCCGGCTAC
GACGGGCGCA TGATCCTCGA CCCGCTGTGC GAGGCGGTGC CCGATCTGCT CGCCCCCGGT
GGCAGCCTGC TGCTCGTACA GTCCGAGTTC GCCGATCCGC GCCGCACCCT GGCAGCCCTG
TCGAGCGCCG GACTGGACGC CGAAGTCATT GCCTGGCAAT GGATCCCGTT CGGCCCCGTG
CTCAACGCGC GGGCCGACTG GCTCGAGGAG ACCGGGCGCC TGGATCCGGG CCGGCGCGAG
GAAGAGCTGT TGGTCATCCG AGCGGACAAA CCGTGA
|
|---|
| Protein sequence | MTTAYTDERD TVVAADGVYA PQEDSQLLID IMEKTGLAVG RRAVDLCTGS GVVAVNAALQ
GASSVTAFDI CPRAVRCARG NALGAGVDVD VHLGSWARAV EFDPFDLVTC NPPYVPHAPE
ADREPVPSSV GPARAWDAGY DGRMILDPLC EAVPDLLAPG GSLLLVQSEF ADPRRTLAAL
SSAGLDAEVI AWQWIPFGPV LNARADWLEE TGRLDPGRRE EELLVIRADK P
|
|---|
| |