Gene Mjls_5202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5202 
Symbol 
ID4880900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5451757 
End bp5452404 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content73% 
IMG OID640142513 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001073457 
Protein GI126437766 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000747567 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCT CGACCCGCTG GACCGTCGCC GTGCTGGCCG TGGTGCTCGC GCTGGTGGTG 
GCGCTGTCGA TGCAGCTCGC CGAGGATCCG GCGCCCACCC GCCGCGACGG GCCGGCACCC
GCCCGCGACC ACCGCGACGC GGACACTCCC GAGGCGCTGG CCGGCCCCCG CGCCGAGGCG
GATCTGCCGC CGTGTCCACC GCCGGGCGTC GGTGCCGGGC CGGAGTCGCT GCGCGGTATC
ACCCTGGAGT GCGCCGGCGA CGGGCAGATG GTCGACGTCG CGCGGTCGCT GGCGGGCCGC
ACCGTGGTGC TCAACCTGTG GGCCTACTGG TGTGGTCCGT GCGCGGACGA ACTGCCCGCC
ATGGCCGAGT ATCAGCGCCG GGTCGGCGAC GCGGTGACGG TGGTGACCGT CCACCAGGAC
GAGAACGAGA CAGCGGGCCT GCTGCGGCTG GCCGAGCTGG GGGTTCGGCT GCCGACACTG
CAGGACGGAC GCCGTTTGAT CGCCGCGGCG GTCAAGGCGC CCAACGTGAT GCCTGCGACG
GTTGTGCTGC GTGCGGACGG TAGCGTGGCC GGAATTGTGC CGCGGTCCTT CGCCACCGCC
GACGAGATCG AGGAAGCGGT GGACCAGACG ATGGGAGAGT CGGGGTGA
 
Protein sequence
MSTSTRWTVA VLAVVLALVV ALSMQLAEDP APTRRDGPAP ARDHRDADTP EALAGPRAEA 
DLPPCPPPGV GAGPESLRGI TLECAGDGQM VDVARSLAGR TVVLNLWAYW CGPCADELPA
MAEYQRRVGD AVTVVTVHQD ENETAGLLRL AELGVRLPTL QDGRRLIAAA VKAPNVMPAT
VVLRADGSVA GIVPRSFATA DEIEEAVDQT MGESG