| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5192 |
|---|
| Symbol | |
|---|
| ID | 4880890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 5440736 |
|---|
| End bp | 5441902 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640142503 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_001073447 |
|---|
| Protein GI | 126437756 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0123395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000832543 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCAT CGCTGATCGA TCGGGTGCGG GAGCGGCTCG CCGCCGAGTC GTCCCCGCTG
CACCCGGCGG TCGTCGCGGC CGCCATCCGG GCGGAGTCGG GTGGCGTCCT CGGTGACACC
GAGGTGCTGA CCAATCTGCG GGCGCTGCAG ACCGAACTGA CCGGTGCGGG TCCGCTCGAA
CCGCTGCTGT GCGCCGACGG CACCACCGAC GTGCTGGTCA CCGCGCCCGA CGCGGTGTGG
ATCGACGACG GAAAGGGCCT GCGCCGCACC ACGGTCCGGT TCGCCGACGA AGGTGCTGTG
CGCCGGCTCG CGCAGCGGCT GGCGCTGGCC GCGGGGCGTC GCCTGGACGA GGCCCAGCCG
TGGGTCGACG GTCAACTGCA CGGGCTCGGC GCGGGCGGGT TCACCGTGCG CCTGCACGCC
GTGCTCCCAC CGGTCGCGGC TGCGGGCACG TGTCTGTCCC TTCGGGTGTT GCGTCCGGCC
ACACAGGATC TGGCCGCGCT GGTCGCCGCG GGCACGATCG CCGACGAGGC GTCGGCGCTG
CTGCGCGACG TGATCGACGC CCGGCTGGCG TTCCTGGTCA GCGGCGGAAC CGGAGCGGGG
AAGACGACGC TGCTCGCCGC CGCGCTCGGC GCGGTCGCCG GCCAAGAACG GATCGTCTGC
GTCGAGGACG CCGCCGAACT GGCGCCGCAG CATCCCCATG TGGTGAAACT GGTCGCCCGC
GGCGCGAACG TCGAGGGAGT CGGCGAGGTG ACCGTGCGCG ATCTCGTACG GCAGGCGCTG
CGGATGCGGC CCGACCGGAT CGTCGTCGGG GAGGTCCGCG GCGCGGAGGT CGTCGACCTG
CTCGCCGCGC TCAACACCGG CCACGACGGC GGTGCGGGGA CCGTACACGC CAACAGCCCC
GCCGAGGTGC CTGCACGGAT GGAGGCCCTC GGCGCGGTCG GCGGGCTCAG CCGAGCGGCG
TTGCACAGCC AGTTGGCCGC CGCGGTGCAG GTGCTCCTGC ACGTGGCGCG CGACCGCACC
GGCGCGCGCC GGCTCACGCA GATCGCGCTG CTGCAACCGC ACGACGACGG ACGCGTGCGC
GTGGTTCCGG CGTGGCAGAT CGATCGTGGG TTCGACGCCG GTGCCGCGGA TTTGCGCCGC
CTGGTGTCGT CGAGGAGGGC GCGATGA
|
|---|
| Protein sequence | MTSSLIDRVR ERLAAESSPL HPAVVAAAIR AESGGVLGDT EVLTNLRALQ TELTGAGPLE
PLLCADGTTD VLVTAPDAVW IDDGKGLRRT TVRFADEGAV RRLAQRLALA AGRRLDEAQP
WVDGQLHGLG AGGFTVRLHA VLPPVAAAGT CLSLRVLRPA TQDLAALVAA GTIADEASAL
LRDVIDARLA FLVSGGTGAG KTTLLAAALG AVAGQERIVC VEDAAELAPQ HPHVVKLVAR
GANVEGVGEV TVRDLVRQAL RMRPDRIVVG EVRGAEVVDL LAALNTGHDG GAGTVHANSP
AEVPARMEAL GAVGGLSRAA LHSQLAAAVQ VLLHVARDRT GARRLTQIAL LQPHDDGRVR
VVPAWQIDRG FDAGAADLRR LVSSRRAR
|
|---|
| |