Gene Mjls_5180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5180 
Symbol 
ID4881582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5427800 
End bp5429008 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content71% 
IMG OID640142491 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_001073435 
Protein GI126437744 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0809147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAG TTTTTTCCCG TTTGGTGGGT CAACACGCTG TTGAGGCGGA GTTGGTGGGT 
GCCGCACAGG CGGCCCGTGG TGATGCCGCT CACAGTGCCT CGGCGACGGG GACCATGACA
CATGCGTGGC TGATCACGGG CCCGCCCGGG TCCGGGAGGT CGATCGCGGC GCTGTGTTTC
GCCGCCGCGC TGCAGTGCAC CTCCGAGGGT GTCCCCGGCT GTGGGGATTG CCGGGCGTGC
ACCACGACGA TGGCCGGTAC GCATGCCGAT GTTCGCCGGA TCATCCCCGA GGGGCTGTCG
ATCGGTGTCG ACGAGATGCG TTCCATCGTG CAGATCGCCT CGCGGCGGCC GGGGACCGGC
CGGTGGCAGA TCGTGGTCGT CGAGGACGCC GACCGACTCA CCGAGGGTGC GGCGAACGCG
CTGCTGAAGG TGGTCGAGGA GCCGCCGCCG TCGACGGTGT TCCTGCTGTG TGCGCCGTCG
GTGGACCCCG AGGACATCGC GATCACGCTG CGGTCGCGCT GTCGGCACGT CGCGCTGGTG
ACGCCGTCGG TGGATGCGAT CACCCAGGTG CTCATCGAGG GTGACGGCAT GTCGGAGCAG
GAGGCCCGCT GGGCGGCGTC GGTGAGCGGC GGGCACGTCG GCCGGGCGCG CCGGCTGGTG
GTCGACGAGC AGGCGCGTGA CCGGCGCAAG CGGGCGCTGA GTCTGGCGCG CGACGCGGCC
ACCCCGTCGC GGGCCTACGC CGCGGCCGAG GAGTTGGTGG CCTCGGCGGA GGCCGAGGCC
AAGGCGTTGA CCGTGGACCG CAACGAGACC GAGGCCGAGG AACTCCGCAC GGCACTGGGA
GCTGGCGGTA CCGGGAAGGG CACCGCGGGC ACCATGCGCG GCGCGACCGG GGCGATCAGG
GATCTGGAGA AGCGGCAGAA GTCGCGCCAG ACGCGTGCGT CGCGCGATGC GCTCGACCGG
GCGCTGATCG ATCTGGCCAC CTACTTCCGG GATGCGCTGC TGGTGTCATC GGGGGCGGGG
CATGTGCAGG CCAACCATCC GGACATGGCG GAGAAGGTCG CCGCGTTGGC GGCGCATGCG
CCCCCGGAGA AGCTGCTGCG CTGCATCGAG GCGGTGCTGG AGTGCCGCGA GGCGCTGGCG
GTCAACGTCA AGCCGAAGTT CGCGGTCGAT GCGATGGTGG CCACCGTCGG ACAGGCGTTG
CGGGACTGA
 
Protein sequence
MAGVFSRLVG QHAVEAELVG AAQAARGDAA HSASATGTMT HAWLITGPPG SGRSIAALCF 
AAALQCTSEG VPGCGDCRAC TTTMAGTHAD VRRIIPEGLS IGVDEMRSIV QIASRRPGTG
RWQIVVVEDA DRLTEGAANA LLKVVEEPPP STVFLLCAPS VDPEDIAITL RSRCRHVALV
TPSVDAITQV LIEGDGMSEQ EARWAASVSG GHVGRARRLV VDEQARDRRK RALSLARDAA
TPSRAYAAAE ELVASAEAEA KALTVDRNET EAEELRTALG AGGTGKGTAG TMRGATGAIR
DLEKRQKSRQ TRASRDALDR ALIDLATYFR DALLVSSGAG HVQANHPDMA EKVAALAAHA
PPEKLLRCIE AVLECREALA VNVKPKFAVD AMVATVGQAL RD