| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5138 |
|---|
| Symbol | |
|---|
| ID | 4880836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5380691 |
|---|
| End bp | 5382022 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640142448 |
|---|
| Product | putative lipoprotein LpqF |
|---|
| Protein accession | YP_001073393 |
|---|
| Protein GI | 126437702 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2367] Beta-lactamase class A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGGG TGGCCGGCCT GGTGACTGCT GCCGCGCTCG TCGTCTCCTC AGTGTCCGGA
TGCGGTCAGA CGAACACCGC TCCGGCCGAC GCCGCCTACG GCGCCCACAT CGGTACCAGC
ACGCCACAGG GTCTGCGGGC CAAACAGACC ATGGACATGG TCAATTCGGA CTGGCCCATC
GGCGACGTCA ACGTGCGCAC GATGGCCGTC GAGGACCAGG TCGACCACAT CATCGACGCC
ATGGGCAATC TGTGGTGGGA CCGCCCGATC ACCGTCACCG GCGTGGACAT CCGCGCGGGC
ACCGCCACGC TGCACGTCAA GACGCCGTAC GGCGCCGAAC AGGACATCGA GTTGCGCACC
GACGACAACG GTCTGGTCGA CCGGTTCGAC GTATCGCTGC GCTCTCCGGT GATCGAGAAG
TGGTCGGACA TCGACGCTGT GCTGGCCGCC TCCGGTGCGC GGTACTCCTA CCAGGTGTCG
CGGGTCGCCG AGGGCGGCAA GTGTCAGCGG GTGGCGGGGA CCAACACCGA GATGTCGCTG
CCGCTGGCGT CGATCTTCAA GCTCTACGTG CTGCTCGCGG TGGCCGAGGC GGTCAAGGTC
GGCAGCGTGG AGTGGGACGA CGAGCTGACC ATCACCGAGC GTGCGAAGGC CGTCGGCTCG
GCCGGTCTGG AGGAGTTGCC GCCAGGGGCG ACCGTATCGG TGCGCGCGGC GGCCCAGCAG
ATGATCTCCT CCAGCGACAA CATGGCGACG GACCTGCTCA TCGAGCGCCT CGGGCCTGGT
GCGGTGGAGC GGGCGCTGGT GGCCGCCGGG CACCACGACC CGGCCAGCAT GACGCCGTTC
CCCACGATGC ACGAGATGTT CTCGGTCGGC TGGGGTGAGC CGGATCTGCG CGAACAGTGG
AAACAGGCCG ACCATCGTGG CCGCGTGGCG CTGCTGAAAC AGACCGACTC ACGGCCGTAC
GAACCCGACC CGACCCGTAC GCACACCCCG GCCTCCGACT ACGGCGCCGA GTGGTACGGC
AGCGCATCCG ACATCTGCCG CGTCCACTCC GCCCTGCAGG CCGCGGCCGT CGGCGAGGCC
GCACCGGTCA AGGACATCCT GTCGGCCATC CCCGGGGTCG AGTTGGACCG TGCCAAGTGG
CCCTACATCG GCGCCAAGGG CGGCAACCTG CCCGGCGACC TGACGTTCAG CTGGTACGCC
GTCGACCACA CCGGCCAGCC GTGGGTGGTC AGCTTCCAGC TCAACTGGCC CCGCTACCGG
AGCCGGACCG CGGCCAGCTG GCTGCTGTCG ATCGTGCACC AGACGTTCGC GATGGTGCCC
GTCGCCGATT AA
|
|---|
| Protein sequence | MRRVAGLVTA AALVVSSVSG CGQTNTAPAD AAYGAHIGTS TPQGLRAKQT MDMVNSDWPI
GDVNVRTMAV EDQVDHIIDA MGNLWWDRPI TVTGVDIRAG TATLHVKTPY GAEQDIELRT
DDNGLVDRFD VSLRSPVIEK WSDIDAVLAA SGARYSYQVS RVAEGGKCQR VAGTNTEMSL
PLASIFKLYV LLAVAEAVKV GSVEWDDELT ITERAKAVGS AGLEELPPGA TVSVRAAAQQ
MISSSDNMAT DLLIERLGPG AVERALVAAG HHDPASMTPF PTMHEMFSVG WGEPDLREQW
KQADHRGRVA LLKQTDSRPY EPDPTRTHTP ASDYGAEWYG SASDICRVHS ALQAAAVGEA
APVKDILSAI PGVELDRAKW PYIGAKGGNL PGDLTFSWYA VDHTGQPWVV SFQLNWPRYR
SRTAASWLLS IVHQTFAMVP VAD
|
|---|
| |