Gene Mjls_5134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5134 
Symbol 
ID4880832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5378250 
End bp5379230 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID640142444 
Producttranscriptional regulator 
Protein accessionYP_001073389 
Protein GI126437698 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.479216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGA AAAGCGTATC GACACTGGTG CTCGACGGTC TAGCGGTTTT CGAGTTCGGC 
GTCATCTGCG AGGTCTTCGG TATCGACCGA TCGGCCGACG GCGTCCCCAA CTTCGACTTC
AAGGTCTGCG GACCGGTGGC CGGTGAACCC GTGCGCACGA CGATCGGCGC GCACCTCACC
CCGCAGCACG ACTACGGCGA TCTACTCGGT GCCGACCTGG TCGCGGTGCC CGCGATAGCC
TCCGGGAAGA ACGGCTATCC GCCCGAGGCG CTGGAAGTGC TGCGCGAGGC GGCGGCGGGC
GGGTCGATCA TCCTGACGGT CTGCTCCGGG GCGTTCGTCG TCGGCGCCGC GGGCCTGCTC
GACGGTCGGC CGTGTACGAC GCACTGGATG TACGCCGATC TGCTGGCGCG GATGTACCCG
ACCGCGCGCG TCGACCGCAA CGTGCTGTTC GTCGACGACG GCAACCTGAT CACCAGTGCG
GGAACCGCGG CCGGTATCGA CGCCTGTCTG CACCTGGTCC GGCGCGAACT GGGCAGCGAG
GTCACCAACC GGATCGCCCG CCGGATGGTC GTACCACCGC AGCGCGACGG CGGCCAGCGG
CAGTACATCG AACAGCCGAT CCCGGTCAGG TGCTCGGAAC GCTTTGCCCC GCATCTGGAT
TGGATCGTGG CCAATCTCGA CAAACCGCAC ACCGTCAGCA CGCTCGCCCG GCGGGCCAAC
ATGTCGGCGC GCACGTTCGC CCGTCGCTTC GTCGAGGAGA CCGGCACCAC GCCCATGCAG
TGGGTGACCG ATCAGCGGGT GCTCTACGCG CGTCGGATGC TGGAGGAGAG CGATCTCGAC
ATCGACCGCA TCGCCGAGCG GTCCGGCTTC GGTACGGCCA CCCTGCTGCG CCACCACTTC
CGGCGGATCA TCGGCGTGAC GCCCACCGAC TACCGCAGGC GGTTCTGCTG CAACGACACC
CAGGCGGAGC GGACCGCCTA G
 
Protein sequence
MALKSVSTLV LDGLAVFEFG VICEVFGIDR SADGVPNFDF KVCGPVAGEP VRTTIGAHLT 
PQHDYGDLLG ADLVAVPAIA SGKNGYPPEA LEVLREAAAG GSIILTVCSG AFVVGAAGLL
DGRPCTTHWM YADLLARMYP TARVDRNVLF VDDGNLITSA GTAAGIDACL HLVRRELGSE
VTNRIARRMV VPPQRDGGQR QYIEQPIPVR CSERFAPHLD WIVANLDKPH TVSTLARRAN
MSARTFARRF VEETGTTPMQ WVTDQRVLYA RRMLEESDLD IDRIAERSGF GTATLLRHHF
RRIIGVTPTD YRRRFCCNDT QAERTA