Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5133 |
Symbol | |
ID | 4880831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 5376376 |
End bp | 5378247 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640142443 |
Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
Protein accession | YP_001073388 |
Protein GI | 126437697 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.582913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGGA CCCTCGATCA GGTCGTCACC GCGGCGGCCG CGGAGTTGAT GGCGGCCACC GCCACCAACG TGGTCGAAAG CTGCACCCGG GTCCTCGCCG ACGTCGTCGC CCACCTGGGG GTCGACTTCA GCTTCCTGCG GCACAACGAC CACACCATCA AGGCCACCAA GCTGGTCGCC GAATGGCCGA TCCGCGACCA CATCCCGGAC CCGGACCCGA TCGGCACCAT CTACTTCGCC GAGGCCGACC CCGTCTTCCG GCAGGCCGAG TACCTCAAGA CACCGCTCAT CGTGCGTCCC GAACCGGACA ACGACGACTA CCAGCGCCGG ATCGAGGAGG GCCGAGGCGT GCCGTCGGTG TCGATGGCAT GCGTGCCATT GCTCTCGGGT GAGATGACCT CTGGCATCCT CGGCTTCATC AAGATCGGTG ACCGTGAGTG GACCACCGAG GAGCAGAACG CGCTGCAGGC GATCGCCACG CTGTTCGCCC AGCTGCAGGC CCGCATCGCC GCCGAGGAGC AGCTCCAGTA CCTCGCCGAA CACGACGATC TGTCCGGACT GCTGAACCGC CGGGCGCTGA TGGCACACCT CGACCGAAGG CTCGCCGAGG GTCAGCCCGG TCCGGTGTCG GTGCTGTTCC TCGATCTCGA CCGGCTCAAG ACCGTCAACG ACTATCTGGG CCACAGCGCC GGTGACCAGT TCATCAAGAT GTTCGCCGAG CGGTTGCGGG CGGGCACCGA GAAGCCCGCC GTGATCGCCC GCGTCGGCGG TGACGAGTTC GTGGTGGTCC CCGATGAGCC GATGGACGTC GTGGCGGTCG AGAGTTTCGC CCGCCGGCTG CAGACGTGGT TGCAGCGGCG GGTCGTGATC GACGGCGAGA TGCTTGCGCG CACAGTGAGC ATCGGGGTCG CCGTCGGCAC TCCCGGTGAC GACACCACAT CGGATCTGCT GCGCCGCGCC GACCAGGCGG CGCTGTCGGC GAAGAGCACC GGCGGCAGCA AGACGGCGGT GTTCACCACG GAGATGGCGT CCCAGCACGC CATCCGCAAC GACATCGAAC TGCACCTCGA GGGTGTCATC GACGAGGCGA GCAGCGCGCT CGTCCTGCAC TACCTACCCG AGATCGACAT GCGCACCGGG AAGGTGCTCG GCACCGAGGC ACTGGTCCGC TGGCGGCATC CGACCCGGGG CCTGCTGCTG CCCGAGTCGT TCATCGGGGT GGCCGAATCC ATCAACCTCG CAGGCAAACT CGGCCGACTG GTGATGCGCT CGGCATGCGC GGACTTCGCC CGCTGGAGGT CGCGCCGCAC CGCAGGCGAC GCCATCCTGC GCCTCAACGT CTCACCCGTG CAACTGGTTT CGGACGGTTT CGCGGCGACC GTCGCCGGCA CCCTCGACGA GTTCGGGGTC GACGGTTCCG CGGTGTGCCT GGAGATCACC GAGAGCGTGG TGGTCCAGGA CATCGAGGCC ACCCGCCACA CACTGGCCGC ACTCAAAGAG GTCGGCGTGC GCATCGCGAT CGACGACTTC GGTACCGGCT ACAGCGTTCT CACGCACCTG AAGTCACTGC CCGTCGACAC CGTCAAGATC GACCGCAGCT TCGTCCGTGA CCTCGGCGCC AGCCCCGGCG ACCTGGCGAT CGTTCGGGCC ATCCTGGCGT TGGCCGATGC GTTCGAACTC GAGGTGGTGG CCGAGGGGGT GGAGACCGTC GCGGCCGCCA AGACGCTGCT CGAACTGGGT TGCCCACGCG CGCAGGGGTT CATGCTGTCG CGTCCGGTCG ACGCCGCGGC GATGGAGGCG TTGTTCCGTG AGGGGCGCAT CGCCGTCGAC GCGTGGCGTG ACGACGCCGC AACCGTGAAC GGGCGGCCGT AG
|
Protein sequence | MTRTLDQVVT AAAAELMAAT ATNVVESCTR VLADVVAHLG VDFSFLRHND HTIKATKLVA EWPIRDHIPD PDPIGTIYFA EADPVFRQAE YLKTPLIVRP EPDNDDYQRR IEEGRGVPSV SMACVPLLSG EMTSGILGFI KIGDREWTTE EQNALQAIAT LFAQLQARIA AEEQLQYLAE HDDLSGLLNR RALMAHLDRR LAEGQPGPVS VLFLDLDRLK TVNDYLGHSA GDQFIKMFAE RLRAGTEKPA VIARVGGDEF VVVPDEPMDV VAVESFARRL QTWLQRRVVI DGEMLARTVS IGVAVGTPGD DTTSDLLRRA DQAALSAKST GGSKTAVFTT EMASQHAIRN DIELHLEGVI DEASSALVLH YLPEIDMRTG KVLGTEALVR WRHPTRGLLL PESFIGVAES INLAGKLGRL VMRSACADFA RWRSRRTAGD AILRLNVSPV QLVSDGFAAT VAGTLDEFGV DGSAVCLEIT ESVVVQDIEA TRHTLAALKE VGVRIAIDDF GTGYSVLTHL KSLPVDTVKI DRSFVRDLGA SPGDLAIVRA ILALADAFEL EVVAEGVETV AAAKTLLELG CPRAQGFMLS RPVDAAAMEA LFREGRIAVD AWRDDAATVN GRP
|
| |