Gene Mjls_5126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5126 
Symbol 
ID4880824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5369805 
End bp5370293 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID640142436 
ProductCarD family transcriptional regulator 
Protein accessionYP_001073381 
Protein GI126437690 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.593452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCA AGGTCGGAGA CACCGTTGTA TATCCACACC ACGGTGCTGC GTTGATCGAA 
GCGATCGAAA CCCGAACCAT CAAGGGCGAG CAGAAGGAGT ATCTCGTCCT CAAGGTCGCC
CAGGGCGATC TCACTGTTCG AGTACCCGCT GACAACGCCG AATATGTCGG GGTGCGCGAC
GTTGTCGGCC AGGAGGGTCT GGACAAGGTC TTCCAGGTGT TGCGCGCGCC GCACACCGAG
GAGCCGACGA ACTGGTCACG CCGGTACAAG GCGAATCTGG AGAAGCTGGC ATCGGGCGAC
GTGAACAAGG TCGCCGAGGT CGTGCGCGAC CTGTGGCGTC GCGATCAGGA GCGCGGCCTG
TCCGCAGGCG AGAAGCGCAT GCTGGCCAAG GCCCGTCAGA TCCTCGTCGG TGAGCTGGCG
CTCGCCGAGA ACGTCGAAGA CGAGAAGGCC ACGATCATCC TCGACGAGGC GTTGGCTGCC
GCGTCCTGA
 
Protein sequence
MIFKVGDTVV YPHHGAALIE AIETRTIKGE QKEYLVLKVA QGDLTVRVPA DNAEYVGVRD 
VVGQEGLDKV FQVLRAPHTE EPTNWSRRYK ANLEKLASGD VNKVAEVVRD LWRRDQERGL
SAGEKRMLAK ARQILVGELA LAENVEDEKA TIILDEALAA AS