| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5125 |
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| Symbol | ispD |
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| ID | 4880823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 5369132 |
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| End bp | 5369797 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640142435 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001073380 |
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| Protein GI | 126437689 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.628248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACAG TGGCCGTTGT TCCGGCCGCG GGTTCCGGTC AACGGCTCGC GGCCGGCGCG
CCCAAAGCGT TCGTGAATCT CGCCGGGCGG CCGATGCTCG AACGCGCCAT CGCCGGGTTG
CGGGACTCCG GTGTCGTCGA CAGCATCGTG GTCGCCGTCC CACCGAGCCG CACCGACGAA
GCGAAGCTGG TCTTCGGCGG TGAGGCGTTG ATCGTCGCGG GCGGCGCCGA CCGCACCGAA
TCGGTGAGCC TCGCGCTCGC CGCCGTCGGC GATGCCGACT ACGTGCTCGT TCACGACGCT
GCGCGCGCAC TCACGCCGCC ATCGCTGGTG GCCCGTGTCG TGCGGGCGCT GGAAGCCGGG
CACAGCGCGG TGGTGCCCGG GCTCCCGGTG GCCGACACGA TCAAGGCCGT CGACGCCAAC
GGCGCCGTAC TCGGCACACC CGAGCGGGCC GGACTGCGCG CGATCCAGAC CCCGCAGGGT
TTCCACATCG ACGTGCTGCG CCGCGCGTAT GCGCGGGCGG GCGACGGCGG TTTCACCGAC
GACGCGTCGA TGGTCGAACA GGCCGGCGGG CAGGTGCAGG TCGTCGACGG CGATCCGCTG
GCCTTCAAGA TCACCACCCC ACTCGACCTC GTGCTGGCCG AGGCGATCCT GGCGGGCGCC
CGGTGA
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| Protein sequence | MTTVAVVPAA GSGQRLAAGA PKAFVNLAGR PMLERAIAGL RDSGVVDSIV VAVPPSRTDE
AKLVFGGEAL IVAGGADRTE SVSLALAAVG DADYVLVHDA ARALTPPSLV ARVVRALEAG
HSAVVPGLPV ADTIKAVDAN GAVLGTPERA GLRAIQTPQG FHIDVLRRAY ARAGDGGFTD
DASMVEQAGG QVQVVDGDPL AFKITTPLDL VLAEAILAGA R
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