Gene Mjls_5122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5122 
Symbol 
ID4880820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5366237 
End bp5367181 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content72% 
IMG OID640142432 
ProductRNA methyltransferase 
Protein accessionYP_001073377 
Protein GI126437686 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.696919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.220958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTA ACTCGAAACG CCGTGGCGCG GTGCGCAAAG CAGGCACCAA GAAGGGGCCG 
ACCGTCGGTT CGGGCGGCGT GCGCCGTCGC GGGCTCGAAG GTCGCGGCGC CACACCGCCG
GCCCATCAGC GGCCCAACCA CCCGGCGGCC AAACGCGCCG CGAAGGCGGC CAAGCAACAG
CAGCGGCGCC CGGCCCGCAA GACCGACGAG ACCGAATTGG TGCTCGGCCG CAACCCCGTC
GTCGAGTGTC TGCGCGCCGA GGTGCCGGCC ACCGCGTTAT ACGTCGCGAT GGGCACCGAG
GCCGACGAGC GGGTGACCGA GGCCGTCCAG ATCGCCGCTG ACAGCGGGAT CTCGATCCTC
GAGGTGCCGC GCTCGGATCT GGACCGGATG AGCAACAACG CCCTGCATCA GGGACTGGGT
TTGCAGGTAC CGCCCTACGA CTACGCCCAC CCCGACGATC TGCTCGCCAC GGCGAAGGCC
GACGGCGCTC CCGCGCTGCT GGTCGCACTG GACAACATCT CCGATCCGCG CAACCTCGGC
GCGATCGTGC GCTCGGTGGC GGCGTTCGGC GGCCACGGGG TGCTGATCCC GCAGCGCCGC
TCGGCGTCGG TGACCGCGGT CGCCTGGCGC ACGAGTGCCG GTGCGGCGGC ACGACTTCCG
GTCGCCCGGG CCACCAACCT CAACCGCACG CTCAAGAGTT GGGCCGACGG GGGCCTGCAG
GTGGTCGGCC TCGACGCCGA CGGGGACACC ACGCTCGACG AACTCGACGG CACCGGCCCG
GTCGTTGTGG TGGTCGGTTC GGAGGGCAAG GGGTTGTCGC GGCTGGTCCG CGAAAACTGC
GATGCGGTGG TGTCGATCCC GATGGCCGGT CCGACCGAAT CGCTGAACGC CTCGGTGGCC
GCCGGGGTGG TGCTCGCCGA GATCGCCCGC CAGCGCCGCA GCTGA
 
Protein sequence
MAGNSKRRGA VRKAGTKKGP TVGSGGVRRR GLEGRGATPP AHQRPNHPAA KRAAKAAKQQ 
QRRPARKTDE TELVLGRNPV VECLRAEVPA TALYVAMGTE ADERVTEAVQ IAADSGISIL
EVPRSDLDRM SNNALHQGLG LQVPPYDYAH PDDLLATAKA DGAPALLVAL DNISDPRNLG
AIVRSVAAFG GHGVLIPQRR SASVTAVAWR TSAGAAARLP VARATNLNRT LKSWADGGLQ
VVGLDADGDT TLDELDGTGP VVVVVGSEGK GLSRLVRENC DAVVSIPMAG PTESLNASVA
AGVVLAEIAR QRRS