Gene Mjls_5117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5117 
Symbol 
ID4880815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5360829 
End bp5362016 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID640142427 
Productcobalamin synthesis CobW domain-containing protein 
Protein accessionYP_001073372 
Protein GI126437681 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.624454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.422171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTC CGGTGATCAT CGTTGCCGGA CAGGGCCAGT CGAACGCGGT GTGTGACGTC 
CTGATGATCG AACCGGGGAC CGTGGTGGTC AGCCACCGCC TGGACGGGCA CGTGGTGGTC
CGCACCGTGG CCACCCACCG TCACCAGCGG GTGCTCGTCT CGGAGTGGCC GTTGGAGCTC
CTGAAAGGCT GCGTGGGCTG CACCACCCGT GGCGATCTGC TTGTCTTGCT GCGGAATCTG
CACCGCCGGG AGGACGTCAC CCGCATCGTC GTGCAGCTCG CACCCTGGCT CGAACCGGAA
CCCGTCTGCT GGGCGATCGA GAACATCGCC GTCCACGTCG GACCCGGCTA CATCGACGGT
CCGGCGAGTC GTGACGTGGC GATCGATGCC GTGGTGACGA CCGTGGACAC TGCCGTGTGG
CTGGCGCAGG CGCTGGGCGA CGACGACCTC GACGACAACC GCACGGTCGC ACAGGTGGTC
GTGGGCCAGG CCGAGTTCGC CGACGTGCTG GTGCTCACCG AACCGGAACG CAGGACACTG
GCCGTGCTGC GCCGGCTGAC CCCGCGCGCG CGGATCACCG TCGGCACAGA CCAGTTCGCC
ACCGCCGTGC GCAACCTCGA ACCCGATGCG CGCCGCGGAC GCGGCCACAG CCCGCACGAT
GCGCTGCTGG CCGGCGAACC GCCGCTGCGC GCCGACGGAG ACGTGACCAT CGTCGAGTTC
AACGCGCGCC GACCGTTTCA CCCGCAGCGG CTCCATCGGG CGATCGACGA TCTGCTCGAC
GGCGTGGTGC GCATCCGCGG GCGGGCGTGG CTGGCCAGCC GGCCCGATGC GGTCGTGTGG
ATCGAATCGG CCGGTGGCGG TCTGCATGTC GGGCACGCCG GTGAATGGCT GGCGGCGATG
AGCCCGAACC AACGGGCTTA CGCCGCACCG GAGCGGGTCG CACTCGCCGC GCTGCACTGG
GACGAGCGCT TCGGCGACCG TCACATCGCC CTGACCCTCT TGGCGTGCGG CGCCGACCCG
CAGACCGTGA CCGGCGCGCT GTCGGGCGCG CTGCTGACCG ACGACGAGCT GACCCGGCCC
GAGACGTGGA CGGCGTACGA GGACCCGTTC GGCGACTGGC ACGAAGACCC GTGCGACCAG
GTCGACGAGT CGACGCCCGC GGCTTCGCAA CGACACGAAG GAGAGTGA
 
Protein sequence
MRTPVIIVAG QGQSNAVCDV LMIEPGTVVV SHRLDGHVVV RTVATHRHQR VLVSEWPLEL 
LKGCVGCTTR GDLLVLLRNL HRREDVTRIV VQLAPWLEPE PVCWAIENIA VHVGPGYIDG
PASRDVAIDA VVTTVDTAVW LAQALGDDDL DDNRTVAQVV VGQAEFADVL VLTEPERRTL
AVLRRLTPRA RITVGTDQFA TAVRNLEPDA RRGRGHSPHD ALLAGEPPLR ADGDVTIVEF
NARRPFHPQR LHRAIDDLLD GVVRIRGRAW LASRPDAVVW IESAGGGLHV GHAGEWLAAM
SPNQRAYAAP ERVALAALHW DERFGDRHIA LTLLACGADP QTVTGALSGA LLTDDELTRP
ETWTAYEDPF GDWHEDPCDQ VDESTPAASQ RHEGE