Gene Mjls_5108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5108 
Symbol 
ID4880806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5354331 
End bp5354969 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID640142418 
Productperiplasmic solute binding protein 
Protein accessionYP_001073363 
Protein GI126437672 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0829709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.108422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGGC ACGTGCAGAC CGCCGCCGAC GCCGGTGTGC CGACGTTGAC GCTCGGCGAC 
CACCTCGATC CGATCCGCTA CGCACAGGGC GACACCGCGG GCGCACCGGA TCCGCACTTC
TGGATGGACC CGCAGCGGAT GATCACCGCC GTCGACGTGA TCGAGCAGGC CGTCAGCCGG
GCGGTCGACG GGGTCGACGT GGCGGTGGTC GCGCGCAACG CCGAACGCTA CCGCGCCGAA
CTGCGGGCGC TCGACGGGTC GATGTCGCTG AAGTTCAACG CGATCACCGA AGGCCGCAGG
AAGCTGGTCA CCAATCACCA CGTGCTGGGC TACCTCGCCG ACCGGTTCGG CTTCCAGGTC
ATCGGCGCCA TCGTGCCGAG CGGCACCACG CTCGCCGCGC CCAGCCCGTC TGACCTCCAG
TCGTTGGCCG GCGCGATCCG TTCGGCCCGG GTGCCTGCGG TCTTCGTCGA CTCGTCGCAG
CCCGAGCGGC TGGCACACGT ACTGGCCGAA CAGGCCGGGG TCCATGTGCG GATCGTGGCC
CTCTACACCG AATCTCTCGG TCCACCCGGC ACTTCGGGCG CGACGTACCT CGACATGATG
CGCGCCAACG CCGACGCCAT CGTCAACGGC CTGAGCTGA
 
Protein sequence
MARHVQTAAD AGVPTLTLGD HLDPIRYAQG DTAGAPDPHF WMDPQRMITA VDVIEQAVSR 
AVDGVDVAVV ARNAERYRAE LRALDGSMSL KFNAITEGRR KLVTNHHVLG YLADRFGFQV
IGAIVPSGTT LAAPSPSDLQ SLAGAIRSAR VPAVFVDSSQ PERLAHVLAE QAGVHVRIVA
LYTESLGPPG TSGATYLDMM RANADAIVNG LS