Gene Mjls_5083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5083 
Symbol 
ID4880781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5329004 
End bp5330191 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content71% 
IMG OID640142393 
Productaspartate aminotransferase 
Protein accessionYP_001073338 
Protein GI126437647 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.347204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.420607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAG CCCACGCACA ACGCACCGAG CCGCGGGACG TGGCCCTACG CGCCGGCATC 
CCGCCGTTCT ACGTGATGGA CGTCTGGCTG GCCGCCGCGG AACGGCAACG CACCCACGGC
GACCTGGTCA ACCTGTCGGC CGGCCAACCG AGCGCCGGCG CGCCGACGGC GGTGCGCGAG
GCCGCCATCG CAGCGCTGCA GGAGAACCAA CTGGGCTACA CCGTCGCGCT CGGCATCCCG
GAACTGCGCG AGGCGATCGC CGCACGGTAC GCCGACCAGT TCGGCCTGAC GGTCGGGCTC
GACGACGTCG TGCTGACCAC CGGGTCGTCG GGCGGATTCC TGCTCGCGTT CCTGGCGTGC
TTCGACGTGG GTGACCGGGT GGCGATCGCC AGCCCCGGCT ACCCCTGCTA CCGCAACATC
CTGACCGCGC TCGGGTGCGA GGTCGTCGAG ATCCCCTGCG GTGCGGACAC CCGTTTCCAA
CCCACCGCCG CGATGCTCGC CGAACTCGAT CCGCCGGTGC AGGGCGTGAT CGTGGCAAGC
CCCGCCAACC CCACCGGCAC GGTCATCGCG CCCGCTGAAC TCGCCGCGAT CGCCACCTGG
TGTGAGGCGA CCGGCACCCG GCTGATCAGC GACGAGGTCT ACCACGGACT CGTCTACGAC
GGCGCCCCGC CGATCAGCTG CGCGTGGCAG ACCTCGCGCA AAGCCGTGGT GGTCAACAGC
TTTTCCAAGT ACTACGCGAT GACCGGGTGG CGGCTGGGCT GGCTGCTGGT GCCGCAGGAA
CTGCGCCGCG CCGTCGACCG GCTCACCGGC AACTTCACTA TCTGCCCGCC CGCGCTGGCT
CAGCACGCCG CGGTGGCCGC GTTCACCCCG GAGTCGACCG CGGAGGCCGA CGGTCTGCTG
GCCCACTACG CCGAGAACCG GCGGCTGTTG CTCGACGGGC TGCGCGCCAT CGGCATCAGC
CGGCTGGCGC CCGCCGACGG CGCGTTCTAC GTCTACGCCG ATGTCTCGCA TCTGACCGAC
GCCTCGTTGT CGTTCTGCGC GAAGCTGCTG GCCGACACCG GAGTCGCGAT CGCACCCGGT
ATCGACTTCG ACACCGTGCA CGGCAACTCG TTCGTCAGGC TGTCGTTCGC CGGGCCGACG
GCCGACATCA CCGAGGCGTT GAGCCGCATC GGGGGCTGGC TGCGCTGA
 
Protein sequence
MSGAHAQRTE PRDVALRAGI PPFYVMDVWL AAAERQRTHG DLVNLSAGQP SAGAPTAVRE 
AAIAALQENQ LGYTVALGIP ELREAIAARY ADQFGLTVGL DDVVLTTGSS GGFLLAFLAC
FDVGDRVAIA SPGYPCYRNI LTALGCEVVE IPCGADTRFQ PTAAMLAELD PPVQGVIVAS
PANPTGTVIA PAELAAIATW CEATGTRLIS DEVYHGLVYD GAPPISCAWQ TSRKAVVVNS
FSKYYAMTGW RLGWLLVPQE LRRAVDRLTG NFTICPPALA QHAAVAAFTP ESTAEADGLL
AHYAENRRLL LDGLRAIGIS RLAPADGAFY VYADVSHLTD ASLSFCAKLL ADTGVAIAPG
IDFDTVHGNS FVRLSFAGPT ADITEALSRI GGWLR