Gene Mjls_5070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5070 
Symbol 
ID4880768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5316108 
End bp5316857 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID640142380 
Productputative CoA transferase beta subunit 
Protein accessionYP_001073325 
Protein GI126437634 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.214302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.392124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGACCCGCGC CGAGGTGTGC GCCGTCGCGT GTGCCGAGCT GTTCCGCGAC 
GCCGGTGAGA TCATGGTCAG CCCGATGGCG AACATGGTGT CGATCGGCGC CCGACTCGCA
CGCCTGACCT TCTCCCCCGA CATCCTGCTG ACCGACGGTG AGGCCCGCCT GCTGGCGGAT
ACGCCCGCGC TCGGCGCGAC GGGCGCCATC GAGGGCTGGA TGCCGTTCGG TCGCGTCTTC
GAGACGCTGA CCTGGGGCCG GCGCCACGTC GTCATGGGCG CCAACCAGAT CGACCGCTAC
GGCAACCAGA ACCTGTCGGC CTTCGGCGCG ATCCAGCATC CGAAGCGGCA GATGTTCGGT
GTGCGCGGCG CACCGGGCAA CACCATCAAC CACGCCACCA GCTACTGGGT CGGCGGGCAC
AGCACGAGGG TCTTCGGCGA ATCGGTCGAC ATCGTGTCCG GCGTGGGGTG GGACAAGGTG
GACCCCGACA ATCCGGCCTA CCGGTTCCTC GACGTCTACC GAGTGGTGAG CAATCTGGGC
GTCTTCGACT TCAACGGACC CGACCACCAG ATGCGCGCGC TGTCACTGCA TCCGGGCGTC
GAGGCCGAAC AGGTCGCCGA GAACACCTCC TTCGAGGTCC ACGGCCTGGA CACCGCCGAG
GTGACCCGCC TGCCCTCCGA CGAGGAGCTG CGCCTGATCC GTGAGGTGAT CGATCCGAAG
TCCCTGCGCG ACAGGGAAAT CCGATCGTGA
 
Protein sequence
MTEPTRAEVC AVACAELFRD AGEIMVSPMA NMVSIGARLA RLTFSPDILL TDGEARLLAD 
TPALGATGAI EGWMPFGRVF ETLTWGRRHV VMGANQIDRY GNQNLSAFGA IQHPKRQMFG
VRGAPGNTIN HATSYWVGGH STRVFGESVD IVSGVGWDKV DPDNPAYRFL DVYRVVSNLG
VFDFNGPDHQ MRALSLHPGV EAEQVAENTS FEVHGLDTAE VTRLPSDEEL RLIREVIDPK
SLRDREIRS