Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5025 |
Symbol | |
ID | 4880723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 5263487 |
End bp | 5265133 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640142335 |
Product | polysaccharide deacetylase |
Protein accession | YP_001073280 |
Protein GI | 126437589 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.794076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCGA CGTCGACGCC CCGCACCCCA TGGCGGACCC GGATCGTGCG GGCTTCGGTT CGCGCCGCGT TCGCGCTCGT CGCCGCGGCG CTGCTGGCGG CGCCCTTCGG GCTGGCGTGG TATCTGCACG TGCGCGGACT GCAGGTGAGC GAGCAGTTCT ACACGCCCGC TTCGTCACTC GCGGCCGACC AGGACGCGCT CGCAGAGACC CTGCGATCCG AACTGCCTGA CCGCGCGGCC CCGGTCGTCC TCGCCTACCA CGACATCCGG CCGATGACGG CGACGGAGGA CCAGCCCGAC CCCGCCGCGG ATCCGCGACA CCATCTCGTC GTCACGCCGG AGGCGTTCGA TGCGCAGCTC ACCGCGCTGC GGGCCGCGGG CTACACCTCC ATCACGTCCG ATCAGTACGT GGACTACCTG GCAGGTGGCG AGGTCCCGGA ACGGTCGGTG CTCCTCACGT TCGACGACGG CACGCACGGA CTGTGGACAT ACGCGGACAA GATCCTCGAG CGACACGGGA TGCACGCGGT GTCGTTCCTC ATCACCGGCA ATGTCGGCGC GAAACGGCCG TATTACCTGT CGTGGCAGGA GATCGAGCGG ATGGCCGACT CCGGCCGGTG GGACTTCCAG TCGCACACCC GGAAGATGCA CGCCCGGCTG CCGATCGATG CCGCGGGCAC CCTGGCATCC GAGATGACGC ACCGCCGTTG GCTTTTCGAG AAGAACCGGT CAGAGACGCT CGACGAGTTC GAAGGCAAGA TCAGAACCGA CCTGCTGGCG TCGGTACAGG ACATCGTCGA CCACGGACTG CCGCGTCCGA CACTGTTCGC CTTCCCGTTC TCCGACGGAT ACGACGAAGA CCGCGCCTCG AGCGACCCAC AGGCTGCCGC GACCGCGCTG ACGGTCGTCC GGGAGATCTT CGCGGGCGCG TTCAACAACG CACCCCCGCA GCCACTGCCC GCCGGTGCCC GGGCCGCGGC GGTGGGAATG ACGGGCCGCA TCGAGCTGAC CGTCGACTCC ACCGTCGAGG GGTTGCTCGA GAGCGTCCGC GCGAAAACGC CTGTCGCCCC GGGCCATGCT GCACCGTCAC GCCGCCCCGA TCTGTGGACA CGGCTGAGCG ACGACACCAA GGCCCCATTG CGCATAGAGG GGAGGGACGT TCGCTTCGAC GGGCCGGGCC GGTGGTCGGG TGCCGCGTAC GGACGTGAGG CGACGGCGGA CTGGGCGTCG TACACGGCGA CGGTCACTGT GGGCGGGTTG GCGGCACGTG GTGTGGAGAA CGGGGCGCTG ATCGCCAGGG TCGGCACCGG CGAAGAGGTG TCGGTCCAGG TCAGCGCGGA GTACGCCCGG GTGTCGATCG GGCTCGGTCC GGCGTGGAAG GTGTTGCGTG ACCTGCCGTT GCCGCCCGGT GACCGGCACA CCGTCACCAT GGAGGTGTCG CCGACGGCCA TCGGCGTGGT CGTGGACGGC TCGGCCCGGA TGTCGGTCCC GGCCGGCGGT GGGCCCGCCG AGTACGGCGG TATCGGGCTG AGCAGTTCGC GGACCACGGA GGCCGCACCG TGGCCGGTCT TCACCGACCT CTCGGTCACC CCGGGCCGGG ACGTTCCGAA TGTCAAAGCG GGGGTAGGGG TTCCGACCCG AAGCTGA
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Protein sequence | MTATSTPRTP WRTRIVRASV RAAFALVAAA LLAAPFGLAW YLHVRGLQVS EQFYTPASSL AADQDALAET LRSELPDRAA PVVLAYHDIR PMTATEDQPD PAADPRHHLV VTPEAFDAQL TALRAAGYTS ITSDQYVDYL AGGEVPERSV LLTFDDGTHG LWTYADKILE RHGMHAVSFL ITGNVGAKRP YYLSWQEIER MADSGRWDFQ SHTRKMHARL PIDAAGTLAS EMTHRRWLFE KNRSETLDEF EGKIRTDLLA SVQDIVDHGL PRPTLFAFPF SDGYDEDRAS SDPQAAATAL TVVREIFAGA FNNAPPQPLP AGARAAAVGM TGRIELTVDS TVEGLLESVR AKTPVAPGHA APSRRPDLWT RLSDDTKAPL RIEGRDVRFD GPGRWSGAAY GREATADWAS YTATVTVGGL AARGVENGAL IARVGTGEEV SVQVSAEYAR VSIGLGPAWK VLRDLPLPPG DRHTVTMEVS PTAIGVVVDG SARMSVPAGG GPAEYGGIGL SSSRTTEAAP WPVFTDLSVT PGRDVPNVKA GVGVPTRS
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