Gene Mjls_5001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5001 
Symbol 
ID4880699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5239945 
End bp5240787 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content66% 
IMG OID640142311 
Producthypothetical protein 
Protein accessionYP_001073256 
Protein GI126437565 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.795605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCG ACGCGACAGT TCGACTGCGC CGCGTCTTCC GCTGGGTGCC CGGCGCGGTG 
GACACCGTGG GTGAGCAGGC GCTCTTCTAC GGCGAGACGA TTCGTTACAT CCCCAACGCG
CTGACCCGGT ACCGCAAGGA GACCATCCGG CTCATCGCCG AGATGACGAT GGGCGCCGGC
GCGTTGGTGA TGATCGGCGG CACGGTCGGT GTCGCGGCGT TCCTCACGTT GGCCTCCGGC
GGTGTGATCG CCGTTCAGGG CTACTCGTCG CTCGGCAACA TCGGTATCGA GGCGCTGACC
GGATTCCTGT CGGCCTTCCT CAACGTCCGC ATCGTCGCGC CGGTCATCGC CGGGATCGCG
CTGGCAGCCA CGATCGGCGC GGGCACCACC GCGCAACTGG GCGCCATGCG CGTCGCCGAG
GAGATCGACG CCGTGGAGAC GATGGCCGTG CACTCGGTGT CGTATCTGGT CTCGACGCGT
CTGATGGCCG GGTTGATCGC GATCGTCCCG CTGTACTCCC TGTCCGTGCT CGCCGCGTTC
TTCGCCGCAC GATTCACGAC GGTGTTCATC AACGGACAGT CCGCCGGCCT CTACGACCAC
TACTTCAACA CGTTCCTGGT GCCCAGTGAC CTGCTGTGGT CGTTCCTGCA GGCCATCGTC
ATGTCGATCG CGGTGATGCT CGTGCACACC TACTACGGCT ACAACGCCTC GGGCGGGCCG
GTCGGGGTCG GTATCGCCGT CGGCCAGGCC GTGCGGACGT CGCTGATCGT GGTCGTCACC
ATCACCCTGT TCATCTCGCT CGCCGTCTAC GGCGCCTCCG GCAACTTCAA CCTGTCGGGG
TAG
 
Protein sequence
MSFDATVRLR RVFRWVPGAV DTVGEQALFY GETIRYIPNA LTRYRKETIR LIAEMTMGAG 
ALVMIGGTVG VAAFLTLASG GVIAVQGYSS LGNIGIEALT GFLSAFLNVR IVAPVIAGIA
LAATIGAGTT AQLGAMRVAE EIDAVETMAV HSVSYLVSTR LMAGLIAIVP LYSLSVLAAF
FAARFTTVFI NGQSAGLYDH YFNTFLVPSD LLWSFLQAIV MSIAVMLVHT YYGYNASGGP
VGVGIAVGQA VRTSLIVVVT ITLFISLAVY GASGNFNLSG