Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4942 |
Symbol | |
ID | 4880641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 5181945 |
End bp | 5184065 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640142252 |
Product | oligopeptidase B |
Protein accession | YP_001073198 |
Protein GI | 126437507 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1770] Protease II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.14279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC CGCCGCCGCA GGCCAAACGG GTTGAACAGC GGCGCGAACA CCACGGCGAC GTGTTCATCG ACCCCTACGA GTGGCTGCGC GACAGATCCG ATCCCGAGGT GCTGGCCCAC CTGGAGGCCG AGAACGCCTA CACCGAGGCG CAGACCGCGC ATCTCGCGCC GTTGCGGCAG AAGATCTTCG ACGAGATCAA GGCCCGCACC AAGGAGACCG ACCTCTCGGT GCCCACCCGG CGCGGCGACT GGTGGTACTA CGGGCGCAGC TTCGAGGGTA AGCAGTACGG CGTCCACTGC CGTTGCCCTG TCGCAGATCC CGAGGACTGG ACACCTCCGG TGCTCGACGA GAACACCACC ATCGACGGTG AACAGGTCCT GCTCGACGAG AACGTCGAAG CCGAGGGCCA CGAGTTCTTC GCGCTCGGGG CGGCCACCGT CAGCATCGAC GGCAACGTCC TGGCCTACTC CGTCGACACA GTGGGCGACG AGCGGTACAC ACTGCGGTTC AAAGACCTCC GCACCGGCGA GCAGTACGAC GACACGATCG TCGGGATCGG TGCCGGCGCC ACCTGGGCCG CCGACAACCG CACCATCTAC TACAGCACCG TCGACGACGC CTGGCGGCCC GACACCGTAT GGCGCCACCG GTTGGGGGCG GGGCTGCCGG CCGAACGGGT GTACCACGAA CCCGACGAAC GGTACTGGCT GGGCGTCGGC CGCACCCGCA GCGACAAGTA CCTGATCATC GCCGCGGGCA GCGCCGTCAC CTCGGAGGTG CGCTACGCCG ACGCGAGTGA TCCGGAGGCG GAGTTCGCCG TGGTGTGGCC GCGCCGCGAC GGGGTCGAGT ACTCCGTCGA ACACGCGGTG GTCGGCGGGG AGGACCGGTT CCTCATCATG CACAACGACG GTGCGGAGAA CTTCGCACTC GTCGACGCGC CGGTGGCCGA TCCGGGCGCG GCCCGCACGC TCATCGAACA CCGCGAGGAC GTGCGACTCG ACGCGGTCGA CGCGTTCGCC GAACACCTCG TGCTGAGTTA CCGCGAAGAG GCACTGCCCA AGATCCAACT GTGGCCCCTG GGCGCCGACG GATCATACGG TCGCGCCGAG GACATCACCT TCGACACCGA ACTGACCTCG GCGGGGCTGG GCGGCAACCC GAACTGGGAC GCGCCGAAAA TGCGCATCGC GGCAACGTCT TTCGTCACCC CGGTGCGGAT CTACGACCTC GACCTCGCAA CAGGGGAGCG CACGCTGCTG CGCGAGCAGC CGGTGCTCGG CGGCTACCGG CCCGAGGACT ACGTCGAGCG CAGGGACTGG GCGATCGCCC CGGACGGCGC GCGGGTGCCC ATCTCGATCG TCCACCGTGC CGGCCTTCAG TTTCCGGCAC CGACCCTGCT CTACGGCTAC GGCGCCTACG AGTCGTGTGA GGACCCACGG TTCTCGATCG CCCGGCTCTC CCTGCTGGAC CGCGGCATGG TGTTCGCCGT CGCCCACGTC CGCGGCGGCG GGGAACTCGG CCGGCCGTGG TACGAACAGG GCAAGATGCT GGAGAAGGGC AACACCTTCA CCGACTTCAT CGCGGTGGCA AGGCATCTCA TCGCCACCGA CACCACGCGG CCGCAGAACC TGGTGGCGCT CGGCGGCAGC GCAGGTGGGT TGTTGATCGG TGCGGTCGCC AACCTGGCGC CCGAACTGTT CGCCGGCTTC CTGGCGCAGG TGCCGTTCGT CGATCCGTTG ACCACGATCC TCGACCCGTC GCTGCCGCTG ACGGTCACCG AGTGGGACGA ATGGGGCAAC CCGCTCGAGC ACGAGCACGT CTACCACTAC ATGAAGTCCT ACTCGCCGTA CGAGAACGTC GTCGCCAAGG ACTATCCGCC GATTCTGGCG ATGACCTCGC TCAACGACAC CCGGGTGTAC TACGTCGAAC CGGCGAAATG GATTGCCGCC CTTCGGCACA CGAAGACCGA CGGGAACCCG GTGCTGCTCA AGACCGAGAT GAGCGCCGGA CACGGCGGGA TCAGCGGACG CTACGAACGG TGGAAGGAAG CCGCGTTCCA GTACGCCTGG GTGCTCGCGA CCGCCGACCC GGAGACCTAC GACAACCGAA GCCCGAACTA G
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Protein sequence | MTVPPPQAKR VEQRREHHGD VFIDPYEWLR DRSDPEVLAH LEAENAYTEA QTAHLAPLRQ KIFDEIKART KETDLSVPTR RGDWWYYGRS FEGKQYGVHC RCPVADPEDW TPPVLDENTT IDGEQVLLDE NVEAEGHEFF ALGAATVSID GNVLAYSVDT VGDERYTLRF KDLRTGEQYD DTIVGIGAGA TWAADNRTIY YSTVDDAWRP DTVWRHRLGA GLPAERVYHE PDERYWLGVG RTRSDKYLII AAGSAVTSEV RYADASDPEA EFAVVWPRRD GVEYSVEHAV VGGEDRFLIM HNDGAENFAL VDAPVADPGA ARTLIEHRED VRLDAVDAFA EHLVLSYREE ALPKIQLWPL GADGSYGRAE DITFDTELTS AGLGGNPNWD APKMRIAATS FVTPVRIYDL DLATGERTLL REQPVLGGYR PEDYVERRDW AIAPDGARVP ISIVHRAGLQ FPAPTLLYGY GAYESCEDPR FSIARLSLLD RGMVFAVAHV RGGGELGRPW YEQGKMLEKG NTFTDFIAVA RHLIATDTTR PQNLVALGGS AGGLLIGAVA NLAPELFAGF LAQVPFVDPL TTILDPSLPL TVTEWDEWGN PLEHEHVYHY MKSYSPYENV VAKDYPPILA MTSLNDTRVY YVEPAKWIAA LRHTKTDGNP VLLKTEMSAG HGGISGRYER WKEAAFQYAW VLATADPETY DNRSPN
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