Gene Mjls_4939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4939 
Symbol 
ID4880638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5180075 
End bp5180779 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID640142249 
Producthypothetical protein 
Protein accessionYP_001073195 
Protein GI126437504 
COG category[R] General function prediction only 
COG ID[COG3233] Predicted deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.250268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGAC AACTGATCCT CTCGATCTCC CACGTCAGCG CGCGCACCCT CGCCGACGTC 
GCCGGGTTCC GCGCCGAACT CGACGCCCGC GGTGTGCCGG CGTCGTTCCT GGTGGCTCCG
CGCCTCAAGG GCGGCTACCG TCTCGACCGC GACGTTCCGA CCGTCGAATG GCTGCGCGAC
CGGCGGGCAT CCGGCGACGC GATCGTGCTG CACGGATTCG ACGAGGCCGC CACCAAGAAG
CGGCGCAGCG AGTTCGCCTC GCTTGCCGCA CACGAGGCCA ACCTGCGACT GATGGGCGCC
GACCGGGTGC TCGAACACCT CGGGCTGCGC ACCCGGCTCT TCGCCGCGCC GGGCTGGACG
GTGTCGCAGG GAACCGTGAT GGCACTGCCG CGCAACGGTT TCCGAGTGCT CGCCGGGCTC
GGCGGCGTGA CCGACCTGGT TCGCGGAACG ACGATGCGGG CCCGCGTGGT GGGCGTCGGC
GCAGGATTTC TGACCGAGCC GTGGTGGTGT CGCACCGTGG TGCTCACCGC CGAGCGCACC
GCCCGGCGCG CCGGCGTGGT CCGACTCAAC GTCTCGGCCA AGCAACTCGC CCGGATCGGA
CCGCGACGAG CCGTGCTGGA TGCGATCGAC CTCGCGTTGA TGCACCGGTG CGCACCCCAG
GTGTACCGGT GGGGACCCGG TGCCGCGCTG AGCGAAGCCG CCTAG
 
Protein sequence
MAGQLILSIS HVSARTLADV AGFRAELDAR GVPASFLVAP RLKGGYRLDR DVPTVEWLRD 
RRASGDAIVL HGFDEAATKK RRSEFASLAA HEANLRLMGA DRVLEHLGLR TRLFAAPGWT
VSQGTVMALP RNGFRVLAGL GGVTDLVRGT TMRARVVGVG AGFLTEPWWC RTVVLTAERT
ARRAGVVRLN VSAKQLARIG PRRAVLDAID LALMHRCAPQ VYRWGPGAAL SEAA